Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shisa8J3QNX5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shisa8J3QNX5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Shisa8J3QNX5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shisa8J3QNX5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shisa8J3QNX5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shisa8J3QNX5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shisa8J3QNX5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shisa8J3QNX5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Shisa8J3QNX5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shisa8J3QNX5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Shisa8J3QNX5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shisa8J3QNX5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shisa8J3QNX5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Shisa8J3QNX5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa8J3QNX5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa8J3QNX5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa8J3QNX5 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.1■□□□□ 0.81
Shisa8J3QNX5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa8J3QNX5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa8J3QNX5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa8J3QNX5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.09■□□□□ 0.81
Shisa8J3QNX5 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.09■□□□□ 0.81
Shisa8J3QNX5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.09■□□□□ 0.81
Shisa8J3QNX5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Shisa8J3QNX5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisa8J3QNX5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shisa8J3QNX5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa8J3QNX5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa8J3QNX5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Shisa8J3QNX5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa8J3QNX5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Shisa8J3QNX5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Shisa8J3QNX5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa8J3QNX5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa8J3QNX5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.05■□□□□ 0.8
Shisa8J3QNX5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa8J3QNX5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.05■□□□□ 0.8
Shisa8J3QNX5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisa8J3QNX5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.05■□□□□ 0.8
Shisa8J3QNX5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa8J3QNX5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa8J3QNX5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa8J3QNX5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa8J3QNX5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.04■□□□□ 0.8
Shisa8J3QNX5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa8J3QNX5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.03■□□□□ 0.8
Shisa8J3QNX5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa8J3QNX5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa8J3QNX5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Shisa8J3QNX5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa8J3QNX5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa8J3QNX5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa8J3QNX5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.02■□□□□ 0.8
Shisa8J3QNX5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shisa8J3QNX5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.02■□□□□ 0.79
Shisa8J3QNX5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa8J3QNX5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa8J3QNX5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa8J3QNX5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa8J3QNX5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
Shisa8J3QNX5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.01■□□□□ 0.79
Shisa8J3QNX5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa8J3QNX5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa8J3QNX5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Shisa8J3QNX5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shisa8J3QNX5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20■□□□□ 0.79
Shisa8J3QNX5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shisa8J3QNX5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shisa8J3QNX5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shisa8J3QNX5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Shisa8J3QNX5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shisa8J3QNX5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shisa8J3QNX5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shisa8J3QNX5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Shisa8J3QNX5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shisa8J3QNX5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.99■□□□□ 0.79
Shisa8J3QNX5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Shisa8J3QNX5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.98■□□□□ 0.79
Shisa8J3QNX5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shisa8J3QNX5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa8J3QNX5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa8J3QNX5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa8J3QNX5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.97■□□□□ 0.79
Shisa8J3QNX5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa8J3QNX5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa8J3QNX5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa8J3QNX5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shisa8J3QNX5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shisa8J3QNX5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Shisa8J3QNX5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.96■□□□□ 0.79
Shisa8J3QNX5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shisa8J3QNX5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shisa8J3QNX5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shisa8J3QNX5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisa8J3QNX5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisa8J3QNX5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisa8J3QNX5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisa8J3QNX5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisa8J3QNX5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms