Protein–RNA interactions for Protein: J3QMM8

Gm7971, Predicted gene 16429, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm7971J3QMM8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm7971J3QMM8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm7971J3QMM8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Gm7971J3QMM8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Gm7971J3QMM8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.41■■□□□ 1.02
Gm7971J3QMM8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm7971J3QMM8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm7971J3QMM8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm7971J3QMM8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Gm7971J3QMM8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.4■■□□□ 1.02
Gm7971J3QMM8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm7971J3QMM8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm7971J3QMM8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm7971J3QMM8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm7971J3QMM8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm7971J3QMM8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm7971J3QMM8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm7971J3QMM8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
Gm7971J3QMM8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.38■■□□□ 1.01
Gm7971J3QMM8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.38■■□□□ 1.01
Gm7971J3QMM8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm7971J3QMM8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm7971J3QMM8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.37■■□□□ 1.01
Gm7971J3QMM8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm7971J3QMM8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm7971J3QMM8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm7971J3QMM8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm7971J3QMM8 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.36■■□□□ 1.01
Gm7971J3QMM8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm7971J3QMM8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.36■■□□□ 1.01
Gm7971J3QMM8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm7971J3QMM8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Gm7971J3QMM8 Gm4799-201ENSMUST00000095396 657 ntBASIC21.35■■□□□ 1.01
Gm7971J3QMM8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm7971J3QMM8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Gm7971J3QMM8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm7971J3QMM8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm7971J3QMM8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm7971J3QMM8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm7971J3QMM8 Gm8503-201ENSMUST00000118131 455 ntBASIC21.34■■□□□ 1.01
Gm7971J3QMM8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm7971J3QMM8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm7971J3QMM8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm7971J3QMM8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm7971J3QMM8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Gm7971J3QMM8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.33■■□□□ 1.01
Gm7971J3QMM8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Gm7971J3QMM8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm7971J3QMM8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm7971J3QMM8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm7971J3QMM8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.32■■□□□ 1
Gm7971J3QMM8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.32■■□□□ 1
Gm7971J3QMM8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm7971J3QMM8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm7971J3QMM8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.31■■□□□ 1
Gm7971J3QMM8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm7971J3QMM8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Gm7971J3QMM8 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.31■■□□□ 1
Gm7971J3QMM8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm7971J3QMM8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.31■■□□□ 1
Gm7971J3QMM8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Gm7971J3QMM8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.3■■□□□ 1
Gm7971J3QMM8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.3■■□□□ 1
Gm7971J3QMM8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm7971J3QMM8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.3■■□□□ 1
Gm7971J3QMM8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm7971J3QMM8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm7971J3QMM8 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.3■■□□□ 1
Gm7971J3QMM8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm7971J3QMM8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm7971J3QMM8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gm7971J3QMM8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm7971J3QMM8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm7971J3QMM8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.29■■□□□ 1
Gm7971J3QMM8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm7971J3QMM8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm7971J3QMM8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Gm7971J3QMM8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm7971J3QMM8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.29■■□□□ 1
Gm7971J3QMM8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.29■■□□□ 1
Gm7971J3QMM8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm7971J3QMM8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm7971J3QMM8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm7971J3QMM8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm7971J3QMM8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm7971J3QMM8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.28■■□□□ 1
Gm7971J3QMM8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Gm7971J3QMM8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm7971J3QMM8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Gm7971J3QMM8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm7971J3QMM8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm7971J3QMM8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm7971J3QMM8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm7971J3QMM8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm7971J3QMM8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm7971J3QMM8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm7971J3QMM8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm7971J3QMM8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gm7971J3QMM8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm7971J3QMM8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms