Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf4lE9Q2N0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cpsf4lE9Q2N0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf4lE9Q2N0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf4lE9Q2N0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf4lE9Q2N0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.77■□□□□ 0.59
Cpsf4lE9Q2N0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cpsf4lE9Q2N0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4lE9Q2N0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4lE9Q2N0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4lE9Q2N0 Gm14523-201ENSMUST00000117260 558 ntBASIC18.76■□□□□ 0.59
Cpsf4lE9Q2N0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.76■□□□□ 0.59
Cpsf4lE9Q2N0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4lE9Q2N0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Gm12366-201ENSMUST00000121722 873 ntBASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Gm5786-201ENSMUST00000085368 882 ntBASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cpsf4lE9Q2N0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4lE9Q2N0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf4lE9Q2N0 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.72■□□□□ 0.59
Cpsf4lE9Q2N0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4lE9Q2N0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4lE9Q2N0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.72■□□□□ 0.59
Cpsf4lE9Q2N0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4lE9Q2N0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4lE9Q2N0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf4lE9Q2N0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cpsf4lE9Q2N0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf4lE9Q2N0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf4lE9Q2N0 Gm7332-201ENSMUST00000118351 454 ntBASIC18.71■□□□□ 0.59
Cpsf4lE9Q2N0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.71■□□□□ 0.59
Cpsf4lE9Q2N0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf4lE9Q2N0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf4lE9Q2N0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf4lE9Q2N0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4lE9Q2N0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4lE9Q2N0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.7■□□□□ 0.58
Cpsf4lE9Q2N0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4lE9Q2N0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4lE9Q2N0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf4lE9Q2N0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cpsf4lE9Q2N0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf4lE9Q2N0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf4lE9Q2N0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf4lE9Q2N0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cpsf4lE9Q2N0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4lE9Q2N0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4lE9Q2N0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.68■□□□□ 0.58
Cpsf4lE9Q2N0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.68■□□□□ 0.58
Cpsf4lE9Q2N0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4lE9Q2N0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cpsf4lE9Q2N0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf4lE9Q2N0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4lE9Q2N0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4lE9Q2N0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4lE9Q2N0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.67■□□□□ 0.58
Cpsf4lE9Q2N0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf4lE9Q2N0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4lE9Q2N0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4lE9Q2N0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4lE9Q2N0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf4lE9Q2N0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4lE9Q2N0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4lE9Q2N0 Cap2-205ENSMUST00000225824 1634 ntBASIC18.66■□□□□ 0.58
Cpsf4lE9Q2N0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4lE9Q2N0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpsf4lE9Q2N0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf4lE9Q2N0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpsf4lE9Q2N0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4lE9Q2N0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4lE9Q2N0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms