Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx6-2D3Z4R4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx6-2D3Z4R4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.01■□□□□ 0.47
Nkx6-2D3Z4R4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx6-2D3Z4R4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx6-2D3Z4R4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx6-2D3Z4R4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx6-2D3Z4R4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx6-2D3Z4R4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nkx6-2D3Z4R4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx6-2D3Z4R4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx6-2D3Z4R4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx6-2D3Z4R4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.98■□□□□ 0.47
Nkx6-2D3Z4R4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx6-2D3Z4R4 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.98■□□□□ 0.47
Nkx6-2D3Z4R4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx6-2D3Z4R4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nkx6-2D3Z4R4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx6-2D3Z4R4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx6-2D3Z4R4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nkx6-2D3Z4R4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx6-2D3Z4R4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.97■□□□□ 0.47
Nkx6-2D3Z4R4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx6-2D3Z4R4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx6-2D3Z4R4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx6-2D3Z4R4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx6-2D3Z4R4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx6-2D3Z4R4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx6-2D3Z4R4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx6-2D3Z4R4 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.96■□□□□ 0.47
Nkx6-2D3Z4R4 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.95■□□□□ 0.46
Nkx6-2D3Z4R4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx6-2D3Z4R4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nkx6-2D3Z4R4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx6-2D3Z4R4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Nkx6-2D3Z4R4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-2D3Z4R4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-2D3Z4R4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-2D3Z4R4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-2D3Z4R4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkx6-2D3Z4R4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-2D3Z4R4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-2D3Z4R4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx6-2D3Z4R4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx6-2D3Z4R4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.93■□□□□ 0.46
Nkx6-2D3Z4R4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx6-2D3Z4R4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx6-2D3Z4R4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx6-2D3Z4R4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx6-2D3Z4R4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx6-2D3Z4R4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nkx6-2D3Z4R4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-2D3Z4R4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-2D3Z4R4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-2D3Z4R4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-2D3Z4R4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx6-2D3Z4R4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx6-2D3Z4R4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.89■□□□□ 0.45
Nkx6-2D3Z4R4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx6-2D3Z4R4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx6-2D3Z4R4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx6-2D3Z4R4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.88■□□□□ 0.45
Nkx6-2D3Z4R4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-2D3Z4R4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-2D3Z4R4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.88■□□□□ 0.45
Nkx6-2D3Z4R4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-2D3Z4R4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-2D3Z4R4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms