Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12887B1AVM1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12887B1AVM1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12887B1AVM1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.91■□□□□ 0.46
Gm12887B1AVM1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12887B1AVM1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Gm12887B1AVM1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12887B1AVM1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.91■□□□□ 0.46
Gm12887B1AVM1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
Gm12887B1AVM1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm12887B1AVM1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12887B1AVM1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12887B1AVM1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm12887B1AVM1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12887B1AVM1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm12887B1AVM1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm12887B1AVM1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm12887B1AVM1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Gm12887B1AVM1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gm12887B1AVM1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm12887B1AVM1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
Gm12887B1AVM1 Gm9397-201ENSMUST00000200125 605 ntBASIC17.89■□□□□ 0.45
Gm12887B1AVM1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gm12887B1AVM1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm12887B1AVM1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm12887B1AVM1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm12887B1AVM1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm12887B1AVM1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gm12887B1AVM1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm12887B1AVM1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm12887B1AVM1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm12887B1AVM1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12887B1AVM1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12887B1AVM1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12887B1AVM1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12887B1AVM1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm12887B1AVM1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12887B1AVM1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12887B1AVM1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.86■□□□□ 0.45
Gm12887B1AVM1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm12887B1AVM1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.85■□□□□ 0.45
Gm12887B1AVM1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.85■□□□□ 0.45
Gm12887B1AVM1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm12887B1AVM1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm12887B1AVM1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12887B1AVM1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12887B1AVM1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12887B1AVM1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12887B1AVM1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Gm12887B1AVM1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm12887B1AVM1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12887B1AVM1 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.83■□□□□ 0.44
Gm12887B1AVM1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Gm12887B1AVM1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.83■□□□□ 0.44
Gm12887B1AVM1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gm12887B1AVM1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12887B1AVM1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12887B1AVM1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12887B1AVM1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12887B1AVM1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Gm12887B1AVM1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12887B1AVM1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12887B1AVM1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12887B1AVM1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12887B1AVM1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12887B1AVM1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12887B1AVM1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm12887B1AVM1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Gm12887B1AVM1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.8■□□□□ 0.44
Gm12887B1AVM1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Gm12887B1AVM1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm12887B1AVM1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12887B1AVM1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12887B1AVM1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12887B1AVM1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12887B1AVM1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12887B1AVM1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm12887B1AVM1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm12887B1AVM1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12887B1AVM1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12887B1AVM1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12887B1AVM1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12887B1AVM1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12887B1AVM1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12887B1AVM1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Gm12887B1AVM1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12887B1AVM1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12887B1AVM1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12887B1AVM1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12887B1AVM1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm12887B1AVM1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Gm12887B1AVM1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm12887B1AVM1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm12887B1AVM1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm12887B1AVM1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm12887B1AVM1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm12887B1AVM1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gm12887B1AVM1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm12887B1AVM1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm12887B1AVM1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms