Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.42■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.42■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.42■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.42■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gm45444-201ENSMUST00000211394 898 ntBASIC18.41■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.41■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.4■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.4■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Rps24-207ENSMUST00000224568 714 ntBASIC18.36■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.36■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.35■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.35■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Gm15820-201ENSMUST00000201566 728 ntBASIC18.35■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl13a-ps1A0A140T8K2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.31■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.3■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.29■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.29■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Rpl13a-ps1A0A140T8K2 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 133.9 ms