Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trbv29A0A0G2LB96 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trbv29A0A0G2LB96 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv29A0A0G2LB96 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv29A0A0G2LB96 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv29A0A0G2LB96 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.3■□□□□ 0.52
Trbv29A0A0G2LB96 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv29A0A0G2LB96 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trbv29A0A0G2LB96 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
Trbv29A0A0G2LB96 Gm4799-201ENSMUST00000095396 657 ntBASIC18.29■□□□□ 0.52
Trbv29A0A0G2LB96 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.28■□□□□ 0.52
Trbv29A0A0G2LB96 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv29A0A0G2LB96 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv29A0A0G2LB96 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv29A0A0G2LB96 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv29A0A0G2LB96 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv29A0A0G2LB96 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv29A0A0G2LB96 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Trbv29A0A0G2LB96 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv29A0A0G2LB96 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Gm9812-201ENSMUST00000061934 968 ntBASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv29A0A0G2LB96 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv29A0A0G2LB96 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbv29A0A0G2LB96 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv29A0A0G2LB96 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv29A0A0G2LB96 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Gm8503-201ENSMUST00000118131 455 ntBASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv29A0A0G2LB96 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv29A0A0G2LB96 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trbv29A0A0G2LB96 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv29A0A0G2LB96 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms