Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav9-4A0A0B4J1K2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav9-4A0A0B4J1K2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav9-4A0A0B4J1K2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav9-4A0A0B4J1K2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav9-4A0A0B4J1K2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-4A0A0B4J1K2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-4A0A0B4J1K2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-4A0A0B4J1K2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9-4A0A0B4J1K2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav9-4A0A0B4J1K2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-4A0A0B4J1K2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-4A0A0B4J1K2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav9-4A0A0B4J1K2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav9-4A0A0B4J1K2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-4A0A0B4J1K2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9-4A0A0B4J1K2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav9-4A0A0B4J1K2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-4A0A0B4J1K2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9-4A0A0B4J1K2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-4A0A0B4J1K2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Trav9-4A0A0B4J1K2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-4A0A0B4J1K2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-4A0A0B4J1K2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav9-4A0A0B4J1K2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-4A0A0B4J1K2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9-4A0A0B4J1K2 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.52■□□□□ 0.23
Trav9-4A0A0B4J1K2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav9-4A0A0B4J1K2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav9-4A0A0B4J1K2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-4A0A0B4J1K2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav9-4A0A0B4J1K2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-4A0A0B4J1K2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-4A0A0B4J1K2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9-4A0A0B4J1K2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Trav9-4A0A0B4J1K2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav9-4A0A0B4J1K2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 Gm12366-201ENSMUST00000121722 873 ntBASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 Gm5786-201ENSMUST00000085368 882 ntBASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-4A0A0B4J1K2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9-4A0A0B4J1K2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9-4A0A0B4J1K2 Gm14523-201ENSMUST00000117260 558 ntBASIC16.48■□□□□ 0.23
Trav9-4A0A0B4J1K2 Gm7332-201ENSMUST00000118351 454 ntBASIC16.48■□□□□ 0.23
Trav9-4A0A0B4J1K2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav9-4A0A0B4J1K2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9-4A0A0B4J1K2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9-4A0A0B4J1K2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9-4A0A0B4J1K2 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.47■□□□□ 0.23
Trav9-4A0A0B4J1K2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9-4A0A0B4J1K2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9-4A0A0B4J1K2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9-4A0A0B4J1K2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9-4A0A0B4J1K2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9-4A0A0B4J1K2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav9-4A0A0B4J1K2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav9-4A0A0B4J1K2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav9-4A0A0B4J1K2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9-4A0A0B4J1K2 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.46■□□□□ 0.23
Trav9-4A0A0B4J1K2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9-4A0A0B4J1K2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-4A0A0B4J1K2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.44■□□□□ 0.22
Trav9-4A0A0B4J1K2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav9-4A0A0B4J1K2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9-4A0A0B4J1K2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav9-4A0A0B4J1K2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-4A0A0B4J1K2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav9-4A0A0B4J1K2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms