Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv16A0A0B4J1H3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv16A0A0B4J1H3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv16A0A0B4J1H3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv16A0A0B4J1H3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv16A0A0B4J1H3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv16A0A0B4J1H3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv16A0A0B4J1H3 Gm4799-201ENSMUST00000095396 657 ntBASIC15.96■□□□□ 0.15
Trbv16A0A0B4J1H3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv16A0A0B4J1H3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv16A0A0B4J1H3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv16A0A0B4J1H3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trbv16A0A0B4J1H3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv16A0A0B4J1H3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Trbv16A0A0B4J1H3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv16A0A0B4J1H3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv16A0A0B4J1H3 Gm9812-201ENSMUST00000061934 968 ntBASIC15.95■□□□□ 0.14
Trbv16A0A0B4J1H3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv16A0A0B4J1H3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trbv16A0A0B4J1H3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv16A0A0B4J1H3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Gm22567-201ENSMUST00000175542 342 ntBASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.94■□□□□ 0.14
Trbv16A0A0B4J1H3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv16A0A0B4J1H3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv16A0A0B4J1H3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv16A0A0B4J1H3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv16A0A0B4J1H3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv16A0A0B4J1H3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv16A0A0B4J1H3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv16A0A0B4J1H3 Gm8503-201ENSMUST00000118131 455 ntBASIC15.9■□□□□ 0.14
Trbv16A0A0B4J1H3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.9■□□□□ 0.14
Trbv16A0A0B4J1H3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv16A0A0B4J1H3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv16A0A0B4J1H3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv16A0A0B4J1H3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv16A0A0B4J1H3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv16A0A0B4J1H3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv16A0A0B4J1H3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv16A0A0B4J1H3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv16A0A0B4J1H3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv16A0A0B4J1H3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms