Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.66■□□□□ 0.74
Trbv2A0A0B4J1G8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trbv2A0A0B4J1G8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv2A0A0B4J1G8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv2A0A0B4J1G8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv2A0A0B4J1G8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.64■□□□□ 0.73
Trbv2A0A0B4J1G8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv2A0A0B4J1G8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv2A0A0B4J1G8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv2A0A0B4J1G8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv2A0A0B4J1G8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv2A0A0B4J1G8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trbv2A0A0B4J1G8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv2A0A0B4J1G8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv2A0A0B4J1G8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Trbv2A0A0B4J1G8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv2A0A0B4J1G8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv2A0A0B4J1G8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv2A0A0B4J1G8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv2A0A0B4J1G8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv2A0A0B4J1G8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv2A0A0B4J1G8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.6■□□□□ 0.73
Trbv2A0A0B4J1G8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Trbv2A0A0B4J1G8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv2A0A0B4J1G8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv2A0A0B4J1G8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv2A0A0B4J1G8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv2A0A0B4J1G8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv2A0A0B4J1G8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trbv2A0A0B4J1G8 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.59■□□□□ 0.73
Trbv2A0A0B4J1G8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.59■□□□□ 0.73
Trbv2A0A0B4J1G8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv2A0A0B4J1G8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv2A0A0B4J1G8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv2A0A0B4J1G8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.59■□□□□ 0.73
Trbv2A0A0B4J1G8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.58■□□□□ 0.73
Trbv2A0A0B4J1G8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv2A0A0B4J1G8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.58■□□□□ 0.72
Trbv2A0A0B4J1G8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trbv2A0A0B4J1G8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv2A0A0B4J1G8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv2A0A0B4J1G8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv2A0A0B4J1G8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv2A0A0B4J1G8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 Gm22567-201ENSMUST00000175542 342 ntBASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv2A0A0B4J1G8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.55■□□□□ 0.72
Trbv2A0A0B4J1G8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv2A0A0B4J1G8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv2A0A0B4J1G8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv2A0A0B4J1G8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv2A0A0B4J1G8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv2A0A0B4J1G8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv2A0A0B4J1G8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv2A0A0B4J1G8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv2A0A0B4J1G8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trbv2A0A0B4J1G8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv2A0A0B4J1G8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Trbv2A0A0B4J1G8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.53■□□□□ 0.72
Trbv2A0A0B4J1G8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv2A0A0B4J1G8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.52■□□□□ 0.72
Trbv2A0A0B4J1G8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
Trbv2A0A0B4J1G8 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.51■□□□□ 0.71
Trbv2A0A0B4J1G8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv2A0A0B4J1G8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv2A0A0B4J1G8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv2A0A0B4J1G8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv2A0A0B4J1G8 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.51■□□□□ 0.71
Trbv2A0A0B4J1G8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv2A0A0B4J1G8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv2A0A0B4J1G8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trbv2A0A0B4J1G8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv2A0A0B4J1G8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trbv2A0A0B4J1G8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.5■□□□□ 0.71
Trbv2A0A0B4J1G8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms