Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav17A0A075B655 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav17A0A075B655 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav17A0A075B655 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav17A0A075B655 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav17A0A075B655 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav17A0A075B655 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav17A0A075B655 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav17A0A075B655 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav17A0A075B655 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav17A0A075B655 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav17A0A075B655 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav17A0A075B655 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav17A0A075B655 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.52■□□□□ 0.39
Trav17A0A075B655 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trav17A0A075B655 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav17A0A075B655 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.52■□□□□ 0.39
Trav17A0A075B655 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.51■□□□□ 0.39
Trav17A0A075B655 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav17A0A075B655 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav17A0A075B655 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav17A0A075B655 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav17A0A075B655 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav17A0A075B655 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav17A0A075B655 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav17A0A075B655 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav17A0A075B655 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav17A0A075B655 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav17A0A075B655 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav17A0A075B655 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav17A0A075B655 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.49■□□□□ 0.39
Trav17A0A075B655 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav17A0A075B655 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav17A0A075B655 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav17A0A075B655 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav17A0A075B655 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav17A0A075B655 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav17A0A075B655 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav17A0A075B655 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav17A0A075B655 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav17A0A075B655 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav17A0A075B655 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav17A0A075B655 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav17A0A075B655 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav17A0A075B655 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav17A0A075B655 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav17A0A075B655 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav17A0A075B655 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav17A0A075B655 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav17A0A075B655 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav17A0A075B655 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav17A0A075B655 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav17A0A075B655 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav17A0A075B655 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav17A0A075B655 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav17A0A075B655 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav17A0A075B655 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.44■□□□□ 0.38
Trav17A0A075B655 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav17A0A075B655 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav17A0A075B655 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav17A0A075B655 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.44■□□□□ 0.38
Trav17A0A075B655 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav17A0A075B655 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav17A0A075B655 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav17A0A075B655 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav17A0A075B655 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav17A0A075B655 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav17A0A075B655 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav17A0A075B655 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav17A0A075B655 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav17A0A075B655 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav17A0A075B655 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav17A0A075B655 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav17A0A075B655 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav17A0A075B655 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav17A0A075B655 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav17A0A075B655 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav17A0A075B655 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav17A0A075B655 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav17A0A075B655 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav17A0A075B655 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav17A0A075B655 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav17A0A075B655 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav17A0A075B655 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav17A0A075B655 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav17A0A075B655 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav17A0A075B655 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav17A0A075B655 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms