Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-1A0A075B5Z8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav6-1A0A075B5Z8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-1A0A075B5Z8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav6-1A0A075B5Z8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav6-1A0A075B5Z8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-1A0A075B5Z8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav6-1A0A075B5Z8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6-1A0A075B5Z8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6-1A0A075B5Z8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-1A0A075B5Z8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-1A0A075B5Z8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav6-1A0A075B5Z8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.76■□□□□ 0.43
Trav6-1A0A075B5Z8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trav6-1A0A075B5Z8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-1A0A075B5Z8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-1A0A075B5Z8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.76■□□□□ 0.43
Trav6-1A0A075B5Z8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trav6-1A0A075B5Z8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav6-1A0A075B5Z8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-1A0A075B5Z8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trav6-1A0A075B5Z8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-1A0A075B5Z8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-1A0A075B5Z8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-1A0A075B5Z8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-1A0A075B5Z8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.74■□□□□ 0.43
Trav6-1A0A075B5Z8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-1A0A075B5Z8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav6-1A0A075B5Z8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-1A0A075B5Z8 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.74■□□□□ 0.43
Trav6-1A0A075B5Z8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-1A0A075B5Z8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-1A0A075B5Z8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Gm22567-201ENSMUST00000175542 342 ntBASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-1A0A075B5Z8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trav6-1A0A075B5Z8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav6-1A0A075B5Z8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-1A0A075B5Z8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav6-1A0A075B5Z8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav6-1A0A075B5Z8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-1A0A075B5Z8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-1A0A075B5Z8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-1A0A075B5Z8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-1A0A075B5Z8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-1A0A075B5Z8 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.68■□□□□ 0.42
Trav6-1A0A075B5Z8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-1A0A075B5Z8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-1A0A075B5Z8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-1A0A075B5Z8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-1A0A075B5Z8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav6-1A0A075B5Z8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-1A0A075B5Z8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-1A0A075B5Z8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-1A0A075B5Z8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms