Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
4933424G06RikA0A140LIP3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm27321-201ENSMUST00000185021 205 ntBASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
4933424G06RikA0A140LIP3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm29541-201ENSMUST00000191351 678 ntBASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
4933424G06RikA0A140LIP3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm13223-201ENSMUST00000118609 747 ntBASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm25144-201ENSMUST00000179561 110 ntBASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Gm25352-201ENSMUST00000179815 110 ntBASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
4933424G06RikA0A140LIP3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
4933424G06RikA0A140LIP3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms