Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.75■■□□□ 1.23
Clcn2Q9R0A1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Clcn2Q9R0A1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Clcn2Q9R0A1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Clcn2Q9R0A1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Clcn2Q9R0A1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Clcn2Q9R0A1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Clcn2Q9R0A1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.74■■□□□ 1.23
Clcn2Q9R0A1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Clcn2Q9R0A1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Clcn2Q9R0A1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Clcn2Q9R0A1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Clcn2Q9R0A1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Clcn2Q9R0A1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.73■■□□□ 1.23
Clcn2Q9R0A1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Clcn2Q9R0A1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Clcn2Q9R0A1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Clcn2Q9R0A1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Clcn2Q9R0A1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.72■■□□□ 1.23
Clcn2Q9R0A1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.72■■□□□ 1.23
Clcn2Q9R0A1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Clcn2Q9R0A1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Clcn2Q9R0A1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Clcn2Q9R0A1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Clcn2Q9R0A1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Clcn2Q9R0A1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Clcn2Q9R0A1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Clcn2Q9R0A1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Clcn2Q9R0A1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.69■■□□□ 1.22
Clcn2Q9R0A1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Clcn2Q9R0A1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Clcn2Q9R0A1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Clcn2Q9R0A1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.69■■□□□ 1.22
Clcn2Q9R0A1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Clcn2Q9R0A1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Clcn2Q9R0A1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Clcn2Q9R0A1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Clcn2Q9R0A1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Clcn2Q9R0A1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.66■■□□□ 1.22
Clcn2Q9R0A1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Clcn2Q9R0A1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Clcn2Q9R0A1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Clcn2Q9R0A1 Gm4799-201ENSMUST00000095396 657 ntBASIC22.65■■□□□ 1.22
Clcn2Q9R0A1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Clcn2Q9R0A1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Clcn2Q9R0A1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Clcn2Q9R0A1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.64■■□□□ 1.21
Clcn2Q9R0A1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.64■■□□□ 1.21
Clcn2Q9R0A1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.64■■□□□ 1.21
Clcn2Q9R0A1 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.63■■□□□ 1.21
Clcn2Q9R0A1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Clcn2Q9R0A1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Clcn2Q9R0A1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Clcn2Q9R0A1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clcn2Q9R0A1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Clcn2Q9R0A1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Clcn2Q9R0A1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.62■■□□□ 1.21
Clcn2Q9R0A1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Clcn2Q9R0A1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clcn2Q9R0A1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clcn2Q9R0A1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clcn2Q9R0A1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Clcn2Q9R0A1 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.6■■□□□ 1.21
Clcn2Q9R0A1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Clcn2Q9R0A1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Clcn2Q9R0A1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Clcn2Q9R0A1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Clcn2Q9R0A1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Clcn2Q9R0A1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Clcn2Q9R0A1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.59■■□□□ 1.21
Clcn2Q9R0A1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clcn2Q9R0A1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Clcn2Q9R0A1 Mir3960-201ENSMUST00000198213 73 ntBASIC22.59■■□□□ 1.21
Clcn2Q9R0A1 Gm45364-201ENSMUST00000210883 159 ntBASIC22.59■■□□□ 1.21
Clcn2Q9R0A1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
Clcn2Q9R0A1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clcn2Q9R0A1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Clcn2Q9R0A1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.58■■□□□ 1.21
Clcn2Q9R0A1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Clcn2Q9R0A1 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.58■■□□□ 1.2
Clcn2Q9R0A1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.58■■□□□ 1.2
Clcn2Q9R0A1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clcn2Q9R0A1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Clcn2Q9R0A1 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.57■■□□□ 1.2
Clcn2Q9R0A1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.57■■□□□ 1.2
Clcn2Q9R0A1 Gm6311-201ENSMUST00000073790 878 ntBASIC22.57■■□□□ 1.2
Clcn2Q9R0A1 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.56■■□□□ 1.2
Clcn2Q9R0A1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Clcn2Q9R0A1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Clcn2Q9R0A1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Clcn2Q9R0A1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Clcn2Q9R0A1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Clcn2Q9R0A1 Gm11175-201ENSMUST00000116172 543 ntBASIC22.55■■□□□ 1.2
Clcn2Q9R0A1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Clcn2Q9R0A1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Clcn2Q9R0A1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.54■■□□□ 1.2
Clcn2Q9R0A1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Clcn2Q9R0A1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.54■■□□□ 1.2
Clcn2Q9R0A1 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.54■■□□□ 1.2
Clcn2Q9R0A1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms