Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rbfox1Q9JJ43 Gm8503-201ENSMUST00000118131 455 ntBASIC18.95■□□□□ 0.62
Rbfox1Q9JJ43 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rbfox1Q9JJ43 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rbfox1Q9JJ43 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rbfox1Q9JJ43 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rbfox1Q9JJ43 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.94■□□□□ 0.62
Rbfox1Q9JJ43 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rbfox1Q9JJ43 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rbfox1Q9JJ43 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox1Q9JJ43 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rbfox1Q9JJ43 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rbfox1Q9JJ43 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rbfox1Q9JJ43 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rbfox1Q9JJ43 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rbfox1Q9JJ43 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.92■□□□□ 0.62
Rbfox1Q9JJ43 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.91■□□□□ 0.62
Rbfox1Q9JJ43 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rbfox1Q9JJ43 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rbfox1Q9JJ43 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rbfox1Q9JJ43 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rbfox1Q9JJ43 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rbfox1Q9JJ43 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.9■□□□□ 0.62
Rbfox1Q9JJ43 Gm9812-201ENSMUST00000061934 968 ntBASIC18.9■□□□□ 0.62
Rbfox1Q9JJ43 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.9■□□□□ 0.62
Rbfox1Q9JJ43 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rbfox1Q9JJ43 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rbfox1Q9JJ43 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rbfox1Q9JJ43 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rbfox1Q9JJ43 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rbfox1Q9JJ43 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rbfox1Q9JJ43 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rbfox1Q9JJ43 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rbfox1Q9JJ43 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rbfox1Q9JJ43 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rbfox1Q9JJ43 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.87■□□□□ 0.61
Rbfox1Q9JJ43 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rbfox1Q9JJ43 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.87■□□□□ 0.61
Rbfox1Q9JJ43 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.87■□□□□ 0.61
Rbfox1Q9JJ43 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rbfox1Q9JJ43 Gm4799-201ENSMUST00000095396 657 ntBASIC18.87■□□□□ 0.61
Rbfox1Q9JJ43 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rbfox1Q9JJ43 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rbfox1Q9JJ43 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rbfox1Q9JJ43 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rbfox1Q9JJ43 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rbfox1Q9JJ43 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rbfox1Q9JJ43 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rbfox1Q9JJ43 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rbfox1Q9JJ43 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rbfox1Q9JJ43 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.85■□□□□ 0.61
Rbfox1Q9JJ43 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rbfox1Q9JJ43 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rbfox1Q9JJ43 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.85■□□□□ 0.61
Rbfox1Q9JJ43 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.85■□□□□ 0.61
Rbfox1Q9JJ43 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox1Q9JJ43 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox1Q9JJ43 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox1Q9JJ43 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox1Q9JJ43 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox1Q9JJ43 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rbfox1Q9JJ43 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rbfox1Q9JJ43 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rbfox1Q9JJ43 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.83■□□□□ 0.61
Rbfox1Q9JJ43 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rbfox1Q9JJ43 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.82■□□□□ 0.6
Rbfox1Q9JJ43 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rbfox1Q9JJ43 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.82■□□□□ 0.6
Rbfox1Q9JJ43 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.82■□□□□ 0.6
Rbfox1Q9JJ43 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.82■□□□□ 0.6
Rbfox1Q9JJ43 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.82■□□□□ 0.6
Rbfox1Q9JJ43 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rbfox1Q9JJ43 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbfox1Q9JJ43 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rbfox1Q9JJ43 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rbfox1Q9JJ43 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.81■□□□□ 0.6
Rbfox1Q9JJ43 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.81■□□□□ 0.6
Rbfox1Q9JJ43 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rbfox1Q9JJ43 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbfox1Q9JJ43 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbfox1Q9JJ43 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.8■□□□□ 0.6
Rbfox1Q9JJ43 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rbfox1Q9JJ43 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.8■□□□□ 0.6
Rbfox1Q9JJ43 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbfox1Q9JJ43 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rbfox1Q9JJ43 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.79■□□□□ 0.6
Rbfox1Q9JJ43 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbfox1Q9JJ43 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbfox1Q9JJ43 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rbfox1Q9JJ43 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbfox1Q9JJ43 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms