Protein–RNA interactions for Protein: Q9ERT9

Ppp1r1a, Protein phosphatase 1 regulatory subunit 1A, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r1aQ9ERT9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ppp1r1aQ9ERT9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ppp1r1aQ9ERT9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r1aQ9ERT9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r1aQ9ERT9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r1aQ9ERT9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r1aQ9ERT9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ppp1r1aQ9ERT9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ppp1r1aQ9ERT9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.25■□□□□ 0.67
Ppp1r1aQ9ERT9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.25■□□□□ 0.67
Ppp1r1aQ9ERT9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r1aQ9ERT9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.25■□□□□ 0.67
Ppp1r1aQ9ERT9 Gm9812-201ENSMUST00000061934 968 ntBASIC19.25■□□□□ 0.67
Ppp1r1aQ9ERT9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r1aQ9ERT9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r1aQ9ERT9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ppp1r1aQ9ERT9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp1r1aQ9ERT9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp1r1aQ9ERT9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ppp1r1aQ9ERT9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp1r1aQ9ERT9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp1r1aQ9ERT9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ppp1r1aQ9ERT9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ppp1r1aQ9ERT9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ppp1r1aQ9ERT9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp1r1aQ9ERT9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp1r1aQ9ERT9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.22■□□□□ 0.67
Ppp1r1aQ9ERT9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.22■□□□□ 0.67
Ppp1r1aQ9ERT9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ppp1r1aQ9ERT9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ppp1r1aQ9ERT9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ppp1r1aQ9ERT9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp1r1aQ9ERT9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.2■□□□□ 0.66
Ppp1r1aQ9ERT9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ppp1r1aQ9ERT9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.2■□□□□ 0.66
Ppp1r1aQ9ERT9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.19■□□□□ 0.66
Ppp1r1aQ9ERT9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp1r1aQ9ERT9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.19■□□□□ 0.66
Ppp1r1aQ9ERT9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ppp1r1aQ9ERT9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp1r1aQ9ERT9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppp1r1aQ9ERT9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ppp1r1aQ9ERT9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.18■□□□□ 0.66
Ppp1r1aQ9ERT9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp1r1aQ9ERT9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.18■□□□□ 0.66
Ppp1r1aQ9ERT9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp1r1aQ9ERT9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp1r1aQ9ERT9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ppp1r1aQ9ERT9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r1aQ9ERT9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r1aQ9ERT9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r1aQ9ERT9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ppp1r1aQ9ERT9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r1aQ9ERT9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ppp1r1aQ9ERT9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r1aQ9ERT9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r1aQ9ERT9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ppp1r1aQ9ERT9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ppp1r1aQ9ERT9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Ppp1r1aQ9ERT9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.12■□□□□ 0.65
Ppp1r1aQ9ERT9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ppp1r1aQ9ERT9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ppp1r1aQ9ERT9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms