Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lime1Q9EQR5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Lime1Q9EQR5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lime1Q9EQR5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lime1Q9EQR5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lime1Q9EQR5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lime1Q9EQR5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lime1Q9EQR5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lime1Q9EQR5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lime1Q9EQR5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.53■□□□□ 0.72
Lime1Q9EQR5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lime1Q9EQR5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lime1Q9EQR5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lime1Q9EQR5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.52■□□□□ 0.71
Lime1Q9EQR5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lime1Q9EQR5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lime1Q9EQR5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lime1Q9EQR5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lime1Q9EQR5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.5■□□□□ 0.71
Lime1Q9EQR5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lime1Q9EQR5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lime1Q9EQR5 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.5■□□□□ 0.71
Lime1Q9EQR5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lime1Q9EQR5 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.5■□□□□ 0.71
Lime1Q9EQR5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.49■□□□□ 0.71
Lime1Q9EQR5 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.49■□□□□ 0.71
Lime1Q9EQR5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lime1Q9EQR5 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.49■□□□□ 0.71
Lime1Q9EQR5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lime1Q9EQR5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lime1Q9EQR5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.48■□□□□ 0.71
Lime1Q9EQR5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Lime1Q9EQR5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lime1Q9EQR5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lime1Q9EQR5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lime1Q9EQR5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lime1Q9EQR5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Lime1Q9EQR5 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.46■□□□□ 0.71
Lime1Q9EQR5 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.46■□□□□ 0.71
Lime1Q9EQR5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.46■□□□□ 0.71
Lime1Q9EQR5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lime1Q9EQR5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lime1Q9EQR5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lime1Q9EQR5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lime1Q9EQR5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lime1Q9EQR5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lime1Q9EQR5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lime1Q9EQR5 Gm6821-201ENSMUST00000107540 542 ntBASIC19.43■□□□□ 0.7
Lime1Q9EQR5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lime1Q9EQR5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lime1Q9EQR5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Lime1Q9EQR5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lime1Q9EQR5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lime1Q9EQR5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.42■□□□□ 0.7
Lime1Q9EQR5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lime1Q9EQR5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lime1Q9EQR5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lime1Q9EQR5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.41■□□□□ 0.7
Lime1Q9EQR5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lime1Q9EQR5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
Lime1Q9EQR5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Lime1Q9EQR5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lime1Q9EQR5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lime1Q9EQR5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lime1Q9EQR5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lime1Q9EQR5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Lime1Q9EQR5 Gm9812-201ENSMUST00000061934 968 ntBASIC19.4■□□□□ 0.7
Lime1Q9EQR5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lime1Q9EQR5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lime1Q9EQR5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lime1Q9EQR5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lime1Q9EQR5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.39■□□□□ 0.69
Lime1Q9EQR5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.39■□□□□ 0.69
Lime1Q9EQR5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lime1Q9EQR5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lime1Q9EQR5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lime1Q9EQR5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lime1Q9EQR5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lime1Q9EQR5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lime1Q9EQR5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms