Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk3bl1Q9D701 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Upk3bl1Q9D701 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk3bl1Q9D701 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Upk3bl1Q9D701 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Upk3bl1Q9D701 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Upk3bl1Q9D701 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Upk3bl1Q9D701 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.27■□□□□ 0.83
Upk3bl1Q9D701 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Upk3bl1Q9D701 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Upk3bl1Q9D701 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Upk3bl1Q9D701 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Upk3bl1Q9D701 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Upk3bl1Q9D701 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Upk3bl1Q9D701 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Upk3bl1Q9D701 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Upk3bl1Q9D701 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Upk3bl1Q9D701 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Upk3bl1Q9D701 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Upk3bl1Q9D701 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Upk3bl1Q9D701 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Upk3bl1Q9D701 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Upk3bl1Q9D701 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.24■□□□□ 0.83
Upk3bl1Q9D701 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.24■□□□□ 0.83
Upk3bl1Q9D701 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Upk3bl1Q9D701 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Upk3bl1Q9D701 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Upk3bl1Q9D701 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Upk3bl1Q9D701 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Upk3bl1Q9D701 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Upk3bl1Q9D701 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Upk3bl1Q9D701 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upk3bl1Q9D701 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Upk3bl1Q9D701 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Upk3bl1Q9D701 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Upk3bl1Q9D701 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Upk3bl1Q9D701 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bl1Q9D701 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bl1Q9D701 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bl1Q9D701 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bl1Q9D701 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.21■□□□□ 0.83
Upk3bl1Q9D701 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bl1Q9D701 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upk3bl1Q9D701 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk3bl1Q9D701 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk3bl1Q9D701 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk3bl1Q9D701 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk3bl1Q9D701 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upk3bl1Q9D701 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk3bl1Q9D701 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk3bl1Q9D701 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.19■□□□□ 0.82
Upk3bl1Q9D701 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk3bl1Q9D701 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk3bl1Q9D701 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Upk3bl1Q9D701 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upk3bl1Q9D701 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk3bl1Q9D701 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.18■□□□□ 0.82
Upk3bl1Q9D701 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk3bl1Q9D701 Gm24804-201ENSMUST00000174982 85 ntBASIC20.18■□□□□ 0.82
Upk3bl1Q9D701 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk3bl1Q9D701 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upk3bl1Q9D701 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upk3bl1Q9D701 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Upk3bl1Q9D701 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upk3bl1Q9D701 Notumos-201ENSMUST00000151998 2659 ntBASIC20.17■□□□□ 0.82
Upk3bl1Q9D701 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upk3bl1Q9D701 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upk3bl1Q9D701 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Upk3bl1Q9D701 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.16■□□□□ 0.82
Upk3bl1Q9D701 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upk3bl1Q9D701 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Upk3bl1Q9D701 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upk3bl1Q9D701 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upk3bl1Q9D701 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upk3bl1Q9D701 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upk3bl1Q9D701 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Upk3bl1Q9D701 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upk3bl1Q9D701 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upk3bl1Q9D701 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Upk3bl1Q9D701 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Upk3bl1Q9D701 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upk3bl1Q9D701 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upk3bl1Q9D701 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upk3bl1Q9D701 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.14■□□□□ 0.81
Upk3bl1Q9D701 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upk3bl1Q9D701 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Upk3bl1Q9D701 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.13■□□□□ 0.81
Upk3bl1Q9D701 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Upk3bl1Q9D701 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upk3bl1Q9D701 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upk3bl1Q9D701 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.12■□□□□ 0.81
Upk3bl1Q9D701 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upk3bl1Q9D701 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upk3bl1Q9D701 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upk3bl1Q9D701 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upk3bl1Q9D701 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upk3bl1Q9D701 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upk3bl1Q9D701 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Upk3bl1Q9D701 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Upk3bl1Q9D701 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 125.8 ms