Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ska1Q9CPV1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ska1Q9CPV1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ska1Q9CPV1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Gm8503-201ENSMUST00000118131 455 ntBASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.92■□□□□ 0.94
Ska1Q9CPV1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ska1Q9CPV1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ska1Q9CPV1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ska1Q9CPV1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ska1Q9CPV1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ska1Q9CPV1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ska1Q9CPV1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ska1Q9CPV1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ska1Q9CPV1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ska1Q9CPV1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ska1Q9CPV1 Gm37136-201ENSMUST00000194368 194 ntBASIC20.89■□□□□ 0.93
Ska1Q9CPV1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ska1Q9CPV1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ska1Q9CPV1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ska1Q9CPV1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ska1Q9CPV1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ska1Q9CPV1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ska1Q9CPV1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ska1Q9CPV1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ska1Q9CPV1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.87■□□□□ 0.93
Ska1Q9CPV1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ska1Q9CPV1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ska1Q9CPV1 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.86■□□□□ 0.93
Ska1Q9CPV1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Ska1Q9CPV1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.86■□□□□ 0.93
Ska1Q9CPV1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ska1Q9CPV1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ska1Q9CPV1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ska1Q9CPV1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ska1Q9CPV1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ska1Q9CPV1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.85■□□□□ 0.93
Ska1Q9CPV1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ska1Q9CPV1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ska1Q9CPV1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ska1Q9CPV1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ska1Q9CPV1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ska1Q9CPV1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ska1Q9CPV1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.84■□□□□ 0.93
Ska1Q9CPV1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ska1Q9CPV1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
Ska1Q9CPV1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ska1Q9CPV1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ska1Q9CPV1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ska1Q9CPV1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ska1Q9CPV1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ska1Q9CPV1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ska1Q9CPV1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ska1Q9CPV1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ska1Q9CPV1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ska1Q9CPV1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ska1Q9CPV1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.81■□□□□ 0.92
Ska1Q9CPV1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ska1Q9CPV1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ska1Q9CPV1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ska1Q9CPV1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.8■□□□□ 0.92
Ska1Q9CPV1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.8■□□□□ 0.92
Ska1Q9CPV1 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.79■□□□□ 0.92
Ska1Q9CPV1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ska1Q9CPV1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ska1Q9CPV1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ska1Q9CPV1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ska1Q9CPV1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.77■□□□□ 0.92
Ska1Q9CPV1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ska1Q9CPV1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ska1Q9CPV1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ska1Q9CPV1 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.77■□□□□ 0.92
Ska1Q9CPV1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Ska1Q9CPV1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ska1Q9CPV1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ska1Q9CPV1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.76■□□□□ 0.91
Ska1Q9CPV1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.76■□□□□ 0.91
Ska1Q9CPV1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.76■□□□□ 0.91
Ska1Q9CPV1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ska1Q9CPV1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Ska1Q9CPV1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ska1Q9CPV1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ska1Q9CPV1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ska1Q9CPV1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ska1Q9CPV1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.75■□□□□ 0.91
Ska1Q9CPV1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ska1Q9CPV1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ska1Q9CPV1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ska1Q9CPV1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ska1Q9CPV1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.75■□□□□ 0.91
Ska1Q9CPV1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.74■□□□□ 0.91
Ska1Q9CPV1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.74■□□□□ 0.91
Ska1Q9CPV1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Ska1Q9CPV1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms