Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Scrt1Q99M85 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scrt1Q99M85 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scrt1Q99M85 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Scrt1Q99M85 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scrt1Q99M85 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Scrt1Q99M85 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.52■□□□□ 0.72
Scrt1Q99M85 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scrt1Q99M85 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scrt1Q99M85 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scrt1Q99M85 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scrt1Q99M85 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scrt1Q99M85 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scrt1Q99M85 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scrt1Q99M85 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.51■□□□□ 0.71
Scrt1Q99M85 Gm45102-201ENSMUST00000207427 857 ntBASIC19.51■□□□□ 0.71
Scrt1Q99M85 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scrt1Q99M85 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scrt1Q99M85 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scrt1Q99M85 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scrt1Q99M85 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Scrt1Q99M85 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scrt1Q99M85 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.49■□□□□ 0.71
Scrt1Q99M85 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scrt1Q99M85 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scrt1Q99M85 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scrt1Q99M85 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scrt1Q99M85 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scrt1Q99M85 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.48■□□□□ 0.71
Scrt1Q99M85 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scrt1Q99M85 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Scrt1Q99M85 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Gm44428-201ENSMUST00000204474 874 ntBASIC19.47■□□□□ 0.71
Scrt1Q99M85 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scrt1Q99M85 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scrt1Q99M85 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Scrt1Q99M85 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scrt1Q99M85 Gm43566-201ENSMUST00000196851 808 ntBASIC19.46■□□□□ 0.71
Scrt1Q99M85 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.46■□□□□ 0.71
Scrt1Q99M85 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scrt1Q99M85 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scrt1Q99M85 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scrt1Q99M85 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scrt1Q99M85 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.45■□□□□ 0.7
Scrt1Q99M85 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Scrt1Q99M85 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scrt1Q99M85 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.44■□□□□ 0.7
Scrt1Q99M85 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.44■□□□□ 0.7
Scrt1Q99M85 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scrt1Q99M85 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Scrt1Q99M85 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.44■□□□□ 0.7
Scrt1Q99M85 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scrt1Q99M85 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.43■□□□□ 0.7
Scrt1Q99M85 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.43■□□□□ 0.7
Scrt1Q99M85 Gm9959-201ENSMUST00000068277 390 ntBASIC19.43■□□□□ 0.7
Scrt1Q99M85 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scrt1Q99M85 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scrt1Q99M85 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scrt1Q99M85 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scrt1Q99M85 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scrt1Q99M85 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scrt1Q99M85 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scrt1Q99M85 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scrt1Q99M85 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scrt1Q99M85 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scrt1Q99M85 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scrt1Q99M85 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.41■□□□□ 0.7
Scrt1Q99M85 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.41■□□□□ 0.7
Scrt1Q99M85 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scrt1Q99M85 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scrt1Q99M85 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scrt1Q99M85 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scrt1Q99M85 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.4■□□□□ 0.7
Scrt1Q99M85 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scrt1Q99M85 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scrt1Q99M85 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scrt1Q99M85 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scrt1Q99M85 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scrt1Q99M85 Gm45444-201ENSMUST00000211394 898 ntBASIC19.39■□□□□ 0.69
Scrt1Q99M85 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scrt1Q99M85 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.38■□□□□ 0.69
Scrt1Q99M85 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scrt1Q99M85 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scrt1Q99M85 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.38■□□□□ 0.69
Scrt1Q99M85 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scrt1Q99M85 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scrt1Q99M85 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Scrt1Q99M85 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.37■□□□□ 0.69
Scrt1Q99M85 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.37■□□□□ 0.69
Scrt1Q99M85 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Scrt1Q99M85 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scrt1Q99M85 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scrt1Q99M85 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms