Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.24■□□□□ 0.99
Nck1Q99M51 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck1Q99M51 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nck1Q99M51 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nck1Q99M51 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nck1Q99M51 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nck1Q99M51 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nck1Q99M51 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nck1Q99M51 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nck1Q99M51 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Nck1Q99M51 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nck1Q99M51 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Nck1Q99M51 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.21■□□□□ 0.99
Nck1Q99M51 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nck1Q99M51 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Nck1Q99M51 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Nck1Q99M51 Gm37136-201ENSMUST00000194368 194 ntBASIC21.2■□□□□ 0.98
Nck1Q99M51 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nck1Q99M51 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nck1Q99M51 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Nck1Q99M51 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Nck1Q99M51 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nck1Q99M51 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nck1Q99M51 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nck1Q99M51 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.19■□□□□ 0.98
Nck1Q99M51 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.18■□□□□ 0.98
Nck1Q99M51 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.18■□□□□ 0.98
Nck1Q99M51 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nck1Q99M51 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nck1Q99M51 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Nck1Q99M51 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nck1Q99M51 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nck1Q99M51 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nck1Q99M51 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nck1Q99M51 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nck1Q99M51 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nck1Q99M51 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nck1Q99M51 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nck1Q99M51 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nck1Q99M51 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nck1Q99M51 Nkain2-201ENSMUST00000092602 558 ntBASIC21.15■□□□□ 0.98
Nck1Q99M51 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Nck1Q99M51 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nck1Q99M51 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.14■□□□□ 0.98
Nck1Q99M51 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Nck1Q99M51 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nck1Q99M51 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nck1Q99M51 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nck1Q99M51 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.12■□□□□ 0.97
Nck1Q99M51 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nck1Q99M51 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.12■□□□□ 0.97
Nck1Q99M51 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nck1Q99M51 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nck1Q99M51 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nck1Q99M51 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Nck1Q99M51 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nck1Q99M51 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.12■□□□□ 0.97
Nck1Q99M51 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.11■□□□□ 0.97
Nck1Q99M51 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nck1Q99M51 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nck1Q99M51 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nck1Q99M51 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.1■□□□□ 0.97
Nck1Q99M51 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nck1Q99M51 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nck1Q99M51 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nck1Q99M51 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nck1Q99M51 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nck1Q99M51 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.09■□□□□ 0.97
Nck1Q99M51 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Nck1Q99M51 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nck1Q99M51 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nck1Q99M51 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nck1Q99M51 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nck1Q99M51 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nck1Q99M51 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nck1Q99M51 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nck1Q99M51 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nck1Q99M51 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nck1Q99M51 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nck1Q99M51 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nck1Q99M51 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nck1Q99M51 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nck1Q99M51 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nck1Q99M51 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nck1Q99M51 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nck1Q99M51 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.05■□□□□ 0.96
Nck1Q99M51 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nck1Q99M51 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nck1Q99M51 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nck1Q99M51 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.04■□□□□ 0.96
Nck1Q99M51 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nck1Q99M51 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nck1Q99M51 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nck1Q99M51 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Nck1Q99M51 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nck1Q99M51 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nck1Q99M51 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nck1Q99M51 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nck1Q99M51 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.02■□□□□ 0.96
Nck1Q99M51 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 191.8 ms