Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.64■■□□□ 1.86
Col20a1Q923P0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col20a1Q923P0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col20a1Q923P0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Col20a1Q923P0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.63■■□□□ 1.85
Col20a1Q923P0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Col20a1Q923P0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col20a1Q923P0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col20a1Q923P0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.61■■□□□ 1.85
Col20a1Q923P0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col20a1Q923P0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Col20a1Q923P0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col20a1Q923P0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Col20a1Q923P0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col20a1Q923P0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Col20a1Q923P0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col20a1Q923P0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Col20a1Q923P0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col20a1Q923P0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.59■■□□□ 1.85
Col20a1Q923P0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col20a1Q923P0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col20a1Q923P0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Col20a1Q923P0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Col20a1Q923P0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Col20a1Q923P0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Col20a1Q923P0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col20a1Q923P0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.57■■□□□ 1.84
Col20a1Q923P0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col20a1Q923P0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
Col20a1Q923P0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col20a1Q923P0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Col20a1Q923P0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.56■■□□□ 1.84
Col20a1Q923P0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col20a1Q923P0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Col20a1Q923P0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col20a1Q923P0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
Col20a1Q923P0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.55■■□□□ 1.84
Col20a1Q923P0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col20a1Q923P0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col20a1Q923P0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col20a1Q923P0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col20a1Q923P0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col20a1Q923P0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col20a1Q923P0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col20a1Q923P0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col20a1Q923P0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Col20a1Q923P0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Col20a1Q923P0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Gm5812-201ENSMUST00000061073 957 ntBASIC26.52■■□□□ 1.84
Col20a1Q923P0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
Col20a1Q923P0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Col20a1Q923P0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Col20a1Q923P0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Col20a1Q923P0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col20a1Q923P0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col20a1Q923P0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.51■■□□□ 1.83
Col20a1Q923P0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Col20a1Q923P0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col20a1Q923P0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Col20a1Q923P0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.5■■□□□ 1.83
Col20a1Q923P0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.5■■□□□ 1.83
Col20a1Q923P0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col20a1Q923P0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col20a1Q923P0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Col20a1Q923P0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Col20a1Q923P0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Col20a1Q923P0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Col20a1Q923P0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Col20a1Q923P0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col20a1Q923P0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col20a1Q923P0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Col20a1Q923P0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Col20a1Q923P0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col20a1Q923P0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Col20a1Q923P0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col20a1Q923P0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.46■■□□□ 1.83
Col20a1Q923P0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Col20a1Q923P0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Col20a1Q923P0 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.46■■□□□ 1.83
Col20a1Q923P0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col20a1Q923P0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.45■■□□□ 1.83
Col20a1Q923P0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Col20a1Q923P0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.45■■□□□ 1.82
Col20a1Q923P0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Col20a1Q923P0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.44■■□□□ 1.82
Col20a1Q923P0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
Col20a1Q923P0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col20a1Q923P0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.44■■□□□ 1.82
Col20a1Q923P0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col20a1Q923P0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Col20a1Q923P0 Gm43566-201ENSMUST00000196851 808 ntBASIC26.43■■□□□ 1.82
Col20a1Q923P0 Gm45444-201ENSMUST00000211394 898 ntBASIC26.43■■□□□ 1.82
Col20a1Q923P0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms