Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb22Q91XZ8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb22Q91XZ8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb22Q91XZ8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.22■■□□□ 1.79
Pcdhb22Q91XZ8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb22Q91XZ8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb22Q91XZ8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Pcdhb22Q91XZ8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.21■■□□□ 1.79
Pcdhb22Q91XZ8 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.2■■□□□ 1.79
Pcdhb22Q91XZ8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhb22Q91XZ8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.19■■□□□ 1.78
Pcdhb22Q91XZ8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Pcdhb22Q91XZ8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhb22Q91XZ8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Pcdhb22Q91XZ8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhb22Q91XZ8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhb22Q91XZ8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.17■■□□□ 1.78
Pcdhb22Q91XZ8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhb22Q91XZ8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb22Q91XZ8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb22Q91XZ8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Pcdhb22Q91XZ8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb22Q91XZ8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Pcdhb22Q91XZ8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb22Q91XZ8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb22Q91XZ8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb22Q91XZ8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.12■■□□□ 1.77
Pcdhb22Q91XZ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb22Q91XZ8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb22Q91XZ8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb22Q91XZ8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb22Q91XZ8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdhb22Q91XZ8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb22Q91XZ8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb22Q91XZ8 Gm27502-201ENSMUST00000183495 199 ntBASIC26.11■■□□□ 1.77
Pcdhb22Q91XZ8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Pcdhb22Q91XZ8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Pcdhb22Q91XZ8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb22Q91XZ8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.1■■□□□ 1.77
Pcdhb22Q91XZ8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.1■■□□□ 1.77
Pcdhb22Q91XZ8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb22Q91XZ8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.09■■□□□ 1.77
Pcdhb22Q91XZ8 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.09■■□□□ 1.77
Pcdhb22Q91XZ8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb22Q91XZ8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb22Q91XZ8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Pcdhb22Q91XZ8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhb22Q91XZ8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhb22Q91XZ8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.08■■□□□ 1.77
Pcdhb22Q91XZ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhb22Q91XZ8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhb22Q91XZ8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb22Q91XZ8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb22Q91XZ8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb22Q91XZ8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.07■■□□□ 1.76
Pcdhb22Q91XZ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb22Q91XZ8 Gm14523-201ENSMUST00000117260 558 ntBASIC26.06■■□□□ 1.76
Pcdhb22Q91XZ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.06■■□□□ 1.76
Pcdhb22Q91XZ8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb22Q91XZ8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Pcdhb22Q91XZ8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Gm12366-201ENSMUST00000121722 873 ntBASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Gm5786-201ENSMUST00000085368 882 ntBASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Pcdhb22Q91XZ8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Pcdhb22Q91XZ8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb22Q91XZ8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb22Q91XZ8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.03■■□□□ 1.76
Pcdhb22Q91XZ8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb22Q91XZ8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb22Q91XZ8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb22Q91XZ8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb22Q91XZ8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Pcdhb22Q91XZ8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhb22Q91XZ8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhb22Q91XZ8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.01■■□□□ 1.75
Pcdhb22Q91XZ8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb22Q91XZ8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb22Q91XZ8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26■■□□□ 1.75
Pcdhb22Q91XZ8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb22Q91XZ8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb22Q91XZ8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb22Q91XZ8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms