Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim60Q8VI40 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23■■□□□ 1.27
Trim60Q8VI40 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim60Q8VI40 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim60Q8VI40 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Trim60Q8VI40 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim60Q8VI40 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim60Q8VI40 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim60Q8VI40 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.99■■□□□ 1.27
Trim60Q8VI40 Gm4799-201ENSMUST00000095396 657 ntBASIC22.99■■□□□ 1.27
Trim60Q8VI40 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.98■■□□□ 1.27
Trim60Q8VI40 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim60Q8VI40 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim60Q8VI40 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Trim60Q8VI40 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.98■■□□□ 1.27
Trim60Q8VI40 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim60Q8VI40 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim60Q8VI40 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Trim60Q8VI40 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim60Q8VI40 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim60Q8VI40 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Trim60Q8VI40 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.96■■□□□ 1.27
Trim60Q8VI40 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Trim60Q8VI40 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Trim60Q8VI40 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim60Q8VI40 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim60Q8VI40 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim60Q8VI40 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim60Q8VI40 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Trim60Q8VI40 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Trim60Q8VI40 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim60Q8VI40 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim60Q8VI40 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.94■■□□□ 1.26
Trim60Q8VI40 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim60Q8VI40 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim60Q8VI40 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim60Q8VI40 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.93■■□□□ 1.26
Trim60Q8VI40 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.93■■□□□ 1.26
Trim60Q8VI40 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Trim60Q8VI40 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim60Q8VI40 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim60Q8VI40 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim60Q8VI40 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Trim60Q8VI40 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim60Q8VI40 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trim60Q8VI40 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.91■■□□□ 1.26
Trim60Q8VI40 Gm9812-201ENSMUST00000061934 968 ntBASIC22.91■■□□□ 1.26
Trim60Q8VI40 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim60Q8VI40 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
Trim60Q8VI40 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim60Q8VI40 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim60Q8VI40 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Trim60Q8VI40 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim60Q8VI40 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim60Q8VI40 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.9■■□□□ 1.26
Trim60Q8VI40 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Trim60Q8VI40 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trim60Q8VI40 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.89■■□□□ 1.26
Trim60Q8VI40 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Trim60Q8VI40 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim60Q8VI40 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim60Q8VI40 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trim60Q8VI40 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trim60Q8VI40 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trim60Q8VI40 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trim60Q8VI40 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trim60Q8VI40 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Trim60Q8VI40 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.86■■□□□ 1.25
Trim60Q8VI40 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Trim60Q8VI40 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Trim60Q8VI40 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trim60Q8VI40 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trim60Q8VI40 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Trim60Q8VI40 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Trim60Q8VI40 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Trim60Q8VI40 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.85■■□□□ 1.25
Trim60Q8VI40 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Trim60Q8VI40 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Trim60Q8VI40 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.85■■□□□ 1.25
Trim60Q8VI40 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trim60Q8VI40 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim60Q8VI40 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.84■■□□□ 1.25
Trim60Q8VI40 Mir3960-201ENSMUST00000198213 73 ntBASIC22.84■■□□□ 1.25
Trim60Q8VI40 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Trim60Q8VI40 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.84■■□□□ 1.25
Trim60Q8VI40 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim60Q8VI40 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Trim60Q8VI40 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim60Q8VI40 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim60Q8VI40 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Trim60Q8VI40 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Trim60Q8VI40 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.82■■□□□ 1.24
Trim60Q8VI40 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms