Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cdhr1Q8VHP6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.78■■□□□ 1.08
Cdhr1Q8VHP6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cdhr1Q8VHP6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdhr1Q8VHP6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cdhr1Q8VHP6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Cdhr1Q8VHP6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.77■■□□□ 1.08
Cdhr1Q8VHP6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cdhr1Q8VHP6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr1Q8VHP6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr1Q8VHP6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cdhr1Q8VHP6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdhr1Q8VHP6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdhr1Q8VHP6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cdhr1Q8VHP6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cdhr1Q8VHP6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.76■■□□□ 1.07
Cdhr1Q8VHP6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Cdhr1Q8VHP6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdhr1Q8VHP6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.75■■□□□ 1.07
Cdhr1Q8VHP6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cdhr1Q8VHP6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.75■■□□□ 1.07
Cdhr1Q8VHP6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdhr1Q8VHP6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdhr1Q8VHP6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdhr1Q8VHP6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdhr1Q8VHP6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdhr1Q8VHP6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Cdhr1Q8VHP6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdhr1Q8VHP6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdhr1Q8VHP6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdhr1Q8VHP6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdhr1Q8VHP6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdhr1Q8VHP6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdhr1Q8VHP6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cdhr1Q8VHP6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cdhr1Q8VHP6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdhr1Q8VHP6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.7■■□□□ 1.06
Cdhr1Q8VHP6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdhr1Q8VHP6 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.7■■□□□ 1.06
Cdhr1Q8VHP6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdhr1Q8VHP6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdhr1Q8VHP6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cdhr1Q8VHP6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.69■■□□□ 1.06
Cdhr1Q8VHP6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.69■■□□□ 1.06
Cdhr1Q8VHP6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdhr1Q8VHP6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.69■■□□□ 1.06
Cdhr1Q8VHP6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdhr1Q8VHP6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr1Q8VHP6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Gm13238-201ENSMUST00000117655 780 ntBASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Gm15546-201ENSMUST00000122095 826 ntBASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr1Q8VHP6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cdhr1Q8VHP6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdhr1Q8VHP6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdhr1Q8VHP6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdhr1Q8VHP6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
Cdhr1Q8VHP6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdhr1Q8VHP6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdhr1Q8VHP6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdhr1Q8VHP6 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.64■■□□□ 1.06
Cdhr1Q8VHP6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdhr1Q8VHP6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdhr1Q8VHP6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdhr1Q8VHP6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdhr1Q8VHP6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 Gm43566-201ENSMUST00000196851 808 ntBASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 Gm45444-201ENSMUST00000211394 898 ntBASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cdhr1Q8VHP6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdhr1Q8VHP6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdhr1Q8VHP6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms