Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd2Q8R3K3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd2Q8R3K3 Gm12922-201ENSMUST00000120626 809 ntBASIC24.19■■□□□ 1.46
Ptcd2Q8R3K3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.19■■□□□ 1.46
Ptcd2Q8R3K3 Spcs1-207ENSMUST00000228767 1008 ntBASIC24.19■■□□□ 1.46
Ptcd2Q8R3K3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.19■■□□□ 1.46
Ptcd2Q8R3K3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptcd2Q8R3K3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptcd2Q8R3K3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptcd2Q8R3K3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ptcd2Q8R3K3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
Ptcd2Q8R3K3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptcd2Q8R3K3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Ptcd2Q8R3K3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptcd2Q8R3K3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ptcd2Q8R3K3 Gm22238-201ENSMUST00000175222 88 ntBASIC24.15■■□□□ 1.46
Ptcd2Q8R3K3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.15■■□□□ 1.46
Ptcd2Q8R3K3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
Ptcd2Q8R3K3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.14■■□□□ 1.45
Ptcd2Q8R3K3 Gm18284-201ENSMUST00000172604 624 ntBASIC24.14■■□□□ 1.45
Ptcd2Q8R3K3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Ptcd2Q8R3K3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ptcd2Q8R3K3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.13■■□□□ 1.45
Ptcd2Q8R3K3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptcd2Q8R3K3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptcd2Q8R3K3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.13■■□□□ 1.45
Ptcd2Q8R3K3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ptcd2Q8R3K3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.12■■□□□ 1.45
Ptcd2Q8R3K3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ptcd2Q8R3K3 Gm27454-201ENSMUST00000185090 204 ntBASIC24.12■■□□□ 1.45
Ptcd2Q8R3K3 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.12■■□□□ 1.45
Ptcd2Q8R3K3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ptcd2Q8R3K3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Ptcd2Q8R3K3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptcd2Q8R3K3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptcd2Q8R3K3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptcd2Q8R3K3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.1■■□□□ 1.45
Ptcd2Q8R3K3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptcd2Q8R3K3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptcd2Q8R3K3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ptcd2Q8R3K3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ptcd2Q8R3K3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ptcd2Q8R3K3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ptcd2Q8R3K3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ptcd2Q8R3K3 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.07■■□□□ 1.44
Ptcd2Q8R3K3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ptcd2Q8R3K3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ptcd2Q8R3K3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ptcd2Q8R3K3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ptcd2Q8R3K3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
Ptcd2Q8R3K3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ptcd2Q8R3K3 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.05■■□□□ 1.44
Ptcd2Q8R3K3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptcd2Q8R3K3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptcd2Q8R3K3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptcd2Q8R3K3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptcd2Q8R3K3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptcd2Q8R3K3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ptcd2Q8R3K3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.04■■□□□ 1.44
Ptcd2Q8R3K3 Gm45417-201ENSMUST00000209533 758 ntBASIC24.04■■□□□ 1.44
Ptcd2Q8R3K3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptcd2Q8R3K3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ptcd2Q8R3K3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd2Q8R3K3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd2Q8R3K3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.03■■□□□ 1.44
Ptcd2Q8R3K3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.02■■□□□ 1.44
Ptcd2Q8R3K3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd2Q8R3K3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd2Q8R3K3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd2Q8R3K3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd2Q8R3K3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd2Q8R3K3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd2Q8R3K3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Gm29257-201ENSMUST00000186115 639 ntBASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd2Q8R3K3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24■■□□□ 1.43
Ptcd2Q8R3K3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ptcd2Q8R3K3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ptcd2Q8R3K3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
Ptcd2Q8R3K3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
Ptcd2Q8R3K3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Ptcd2Q8R3K3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms