Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r28Q8R2C9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.48■□□□□ 0.87
Vmn1r28Q8R2C9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r28Q8R2C9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r28Q8R2C9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r28Q8R2C9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r28Q8R2C9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.47■□□□□ 0.87
Vmn1r28Q8R2C9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r28Q8R2C9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r28Q8R2C9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r28Q8R2C9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r28Q8R2C9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.46■□□□□ 0.87
Vmn1r28Q8R2C9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Vmn1r28Q8R2C9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Vmn1r28Q8R2C9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r28Q8R2C9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.45■□□□□ 0.86
Vmn1r28Q8R2C9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r28Q8R2C9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.45■□□□□ 0.86
Vmn1r28Q8R2C9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r28Q8R2C9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r28Q8R2C9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r28Q8R2C9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r28Q8R2C9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vmn1r28Q8R2C9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r28Q8R2C9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.44■□□□□ 0.86
Vmn1r28Q8R2C9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.44■□□□□ 0.86
Vmn1r28Q8R2C9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r28Q8R2C9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r28Q8R2C9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r28Q8R2C9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r28Q8R2C9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r28Q8R2C9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.4■□□□□ 0.86
Vmn1r28Q8R2C9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r28Q8R2C9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r28Q8R2C9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.4■□□□□ 0.86
Vmn1r28Q8R2C9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Vmn1r28Q8R2C9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.39■□□□□ 0.85
Vmn1r28Q8R2C9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r28Q8R2C9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r28Q8R2C9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Vmn1r28Q8R2C9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r28Q8R2C9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r28Q8R2C9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r28Q8R2C9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r28Q8R2C9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.37■□□□□ 0.85
Vmn1r28Q8R2C9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r28Q8R2C9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r28Q8R2C9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r28Q8R2C9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r28Q8R2C9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.36■□□□□ 0.85
Vmn1r28Q8R2C9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.36■□□□□ 0.85
Vmn1r28Q8R2C9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vmn1r28Q8R2C9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r28Q8R2C9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r28Q8R2C9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.36■□□□□ 0.85
Vmn1r28Q8R2C9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r28Q8R2C9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.35■□□□□ 0.85
Vmn1r28Q8R2C9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r28Q8R2C9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Vmn1r28Q8R2C9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r28Q8R2C9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r28Q8R2C9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r28Q8R2C9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r28Q8R2C9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vmn1r28Q8R2C9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vmn1r28Q8R2C9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Vmn1r28Q8R2C9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.33■□□□□ 0.85
Vmn1r28Q8R2C9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.33■□□□□ 0.85
Vmn1r28Q8R2C9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r28Q8R2C9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r28Q8R2C9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Vmn1r28Q8R2C9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms