Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf4Q8K4J2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf4Q8K4J2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ebf4Q8K4J2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ebf4Q8K4J2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Ebf4Q8K4J2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ebf4Q8K4J2 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.41■□□□□ 0.86
Ebf4Q8K4J2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ebf4Q8K4J2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ebf4Q8K4J2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ebf4Q8K4J2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ebf4Q8K4J2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ebf4Q8K4J2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ebf4Q8K4J2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ebf4Q8K4J2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ebf4Q8K4J2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ebf4Q8K4J2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf4Q8K4J2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf4Q8K4J2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf4Q8K4J2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf4Q8K4J2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf4Q8K4J2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf4Q8K4J2 Notumos-201ENSMUST00000151998 2659 ntBASIC20.38■□□□□ 0.85
Ebf4Q8K4J2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf4Q8K4J2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.37■□□□□ 0.85
Ebf4Q8K4J2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.37■□□□□ 0.85
Ebf4Q8K4J2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ebf4Q8K4J2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf4Q8K4J2 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.36■□□□□ 0.85
Ebf4Q8K4J2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ebf4Q8K4J2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf4Q8K4J2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf4Q8K4J2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf4Q8K4J2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ebf4Q8K4J2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf4Q8K4J2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf4Q8K4J2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf4Q8K4J2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf4Q8K4J2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf4Q8K4J2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.35■□□□□ 0.85
Ebf4Q8K4J2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf4Q8K4J2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf4Q8K4J2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf4Q8K4J2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf4Q8K4J2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.34■□□□□ 0.85
Ebf4Q8K4J2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ebf4Q8K4J2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ebf4Q8K4J2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ebf4Q8K4J2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.33■□□□□ 0.85
Ebf4Q8K4J2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ebf4Q8K4J2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf4Q8K4J2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf4Q8K4J2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf4Q8K4J2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf4Q8K4J2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf4Q8K4J2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf4Q8K4J2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf4Q8K4J2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ebf4Q8K4J2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ebf4Q8K4J2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ebf4Q8K4J2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf4Q8K4J2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf4Q8K4J2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Ebf4Q8K4J2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf4Q8K4J2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ebf4Q8K4J2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf4Q8K4J2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf4Q8K4J2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf4Q8K4J2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf4Q8K4J2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.28■□□□□ 0.84
Ebf4Q8K4J2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ebf4Q8K4J2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.28■□□□□ 0.84
Ebf4Q8K4J2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf4Q8K4J2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf4Q8K4J2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ebf4Q8K4J2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ebf4Q8K4J2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf4Q8K4J2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ebf4Q8K4J2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ebf4Q8K4J2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.25■□□□□ 0.83
Ebf4Q8K4J2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf4Q8K4J2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf4Q8K4J2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ebf4Q8K4J2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ebf4Q8K4J2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf4Q8K4J2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf4Q8K4J2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf4Q8K4J2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf4Q8K4J2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Ebf4Q8K4J2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ebf4Q8K4J2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ebf4Q8K4J2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.23■□□□□ 0.83
Ebf4Q8K4J2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ebf4Q8K4J2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ebf4Q8K4J2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.23■□□□□ 0.83
Ebf4Q8K4J2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ebf4Q8K4J2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ebf4Q8K4J2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.22■□□□□ 0.83
Ebf4Q8K4J2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.22■□□□□ 0.83
Ebf4Q8K4J2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms