Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cnot6Q8K3P5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cnot6Q8K3P5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cnot6Q8K3P5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cnot6Q8K3P5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cnot6Q8K3P5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cnot6Q8K3P5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cnot6Q8K3P5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cnot6Q8K3P5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cnot6Q8K3P5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cnot6Q8K3P5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.78■■□□□ 1.08
Cnot6Q8K3P5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cnot6Q8K3P5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cnot6Q8K3P5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cnot6Q8K3P5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cnot6Q8K3P5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.77■■□□□ 1.08
Cnot6Q8K3P5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cnot6Q8K3P5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.76■■□□□ 1.07
Cnot6Q8K3P5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
Cnot6Q8K3P5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cnot6Q8K3P5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cnot6Q8K3P5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Cnot6Q8K3P5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cnot6Q8K3P5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cnot6Q8K3P5 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.75■■□□□ 1.07
Cnot6Q8K3P5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cnot6Q8K3P5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.75■■□□□ 1.07
Cnot6Q8K3P5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Cnot6Q8K3P5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cnot6Q8K3P5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cnot6Q8K3P5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cnot6Q8K3P5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cnot6Q8K3P5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cnot6Q8K3P5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Cnot6Q8K3P5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cnot6Q8K3P5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cnot6Q8K3P5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cnot6Q8K3P5 Gm37136-201ENSMUST00000194368 194 ntBASIC21.72■■□□□ 1.07
Cnot6Q8K3P5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cnot6Q8K3P5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cnot6Q8K3P5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnot6Q8K3P5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.71■■□□□ 1.07
Cnot6Q8K3P5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnot6Q8K3P5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cnot6Q8K3P5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnot6Q8K3P5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnot6Q8K3P5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnot6Q8K3P5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cnot6Q8K3P5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cnot6Q8K3P5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cnot6Q8K3P5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cnot6Q8K3P5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cnot6Q8K3P5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.7■■□□□ 1.06
Cnot6Q8K3P5 Gm7432-201ENSMUST00000210343 879 ntBASIC21.7■■□□□ 1.06
Cnot6Q8K3P5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.7■■□□□ 1.06
Cnot6Q8K3P5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Cnot6Q8K3P5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cnot6Q8K3P5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cnot6Q8K3P5 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.68■■□□□ 1.06
Cnot6Q8K3P5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.68■■□□□ 1.06
Cnot6Q8K3P5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.68■■□□□ 1.06
Cnot6Q8K3P5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.67■■□□□ 1.06
Cnot6Q8K3P5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cnot6Q8K3P5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cnot6Q8K3P5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cnot6Q8K3P5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Cnot6Q8K3P5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cnot6Q8K3P5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnot6Q8K3P5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnot6Q8K3P5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cnot6Q8K3P5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnot6Q8K3P5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnot6Q8K3P5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnot6Q8K3P5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cnot6Q8K3P5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cnot6Q8K3P5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cnot6Q8K3P5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.64■■□□□ 1.05
Cnot6Q8K3P5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cnot6Q8K3P5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.63■■□□□ 1.05
Cnot6Q8K3P5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cnot6Q8K3P5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cnot6Q8K3P5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cnot6Q8K3P5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cnot6Q8K3P5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cnot6Q8K3P5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cnot6Q8K3P5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Cnot6Q8K3P5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cnot6Q8K3P5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cnot6Q8K3P5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cnot6Q8K3P5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cnot6Q8K3P5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms