Protein–RNA interactions for Protein: Q8K0S9

Snapc1, snRNA-activating protein complex subunit 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc1Q8K0S9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Snapc1Q8K0S9 Gm24970-201ENSMUST00000175582 82 ntBASIC21.47■■□□□ 1.03
Snapc1Q8K0S9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Snapc1Q8K0S9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Snapc1Q8K0S9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Snapc1Q8K0S9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snapc1Q8K0S9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Snapc1Q8K0S9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.46■■□□□ 1.03
Snapc1Q8K0S9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.46■■□□□ 1.03
Snapc1Q8K0S9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.45■■□□□ 1.03
Snapc1Q8K0S9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Snapc1Q8K0S9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Snapc1Q8K0S9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Snapc1Q8K0S9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Snapc1Q8K0S9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Snapc1Q8K0S9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.45■■□□□ 1.02
Snapc1Q8K0S9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Snapc1Q8K0S9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snapc1Q8K0S9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snapc1Q8K0S9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snapc1Q8K0S9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snapc1Q8K0S9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Snapc1Q8K0S9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snapc1Q8K0S9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snapc1Q8K0S9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.43■■□□□ 1.02
Snapc1Q8K0S9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snapc1Q8K0S9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Snapc1Q8K0S9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Snapc1Q8K0S9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.41■■□□□ 1.02
Snapc1Q8K0S9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Snapc1Q8K0S9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Snapc1Q8K0S9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.4■■□□□ 1.02
Snapc1Q8K0S9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Snapc1Q8K0S9 Gm9397-201ENSMUST00000200125 605 ntBASIC21.4■■□□□ 1.02
Snapc1Q8K0S9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Snapc1Q8K0S9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Snapc1Q8K0S9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Snapc1Q8K0S9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Snapc1Q8K0S9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Snapc1Q8K0S9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Snapc1Q8K0S9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Snapc1Q8K0S9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Snapc1Q8K0S9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Snapc1Q8K0S9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snapc1Q8K0S9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Snapc1Q8K0S9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snapc1Q8K0S9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Snapc1Q8K0S9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.37■■□□□ 1.01
Snapc1Q8K0S9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Snapc1Q8K0S9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snapc1Q8K0S9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Snapc1Q8K0S9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snapc1Q8K0S9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
Snapc1Q8K0S9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snapc1Q8K0S9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Snapc1Q8K0S9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snapc1Q8K0S9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snapc1Q8K0S9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.34■■□□□ 1.01
Snapc1Q8K0S9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Snapc1Q8K0S9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Snapc1Q8K0S9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Snapc1Q8K0S9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Snapc1Q8K0S9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Snapc1Q8K0S9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snapc1Q8K0S9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snapc1Q8K0S9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Snapc1Q8K0S9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.33■■□□□ 1
Snapc1Q8K0S9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snapc1Q8K0S9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snapc1Q8K0S9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Snapc1Q8K0S9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.32■■□□□ 1
Snapc1Q8K0S9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snapc1Q8K0S9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snapc1Q8K0S9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snapc1Q8K0S9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.31■■□□□ 1
Snapc1Q8K0S9 Gm45855-201ENSMUST00000212546 880 ntBASIC21.31■■□□□ 1
Snapc1Q8K0S9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Snapc1Q8K0S9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.31■■□□□ 1
Snapc1Q8K0S9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.31■■□□□ 1
Snapc1Q8K0S9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snapc1Q8K0S9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.3■■□□□ 1
Snapc1Q8K0S9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Snapc1Q8K0S9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.29■■□□□ 1
Snapc1Q8K0S9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snapc1Q8K0S9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Snapc1Q8K0S9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snapc1Q8K0S9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snapc1Q8K0S9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Snapc1Q8K0S9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.29■■□□□ 1
Snapc1Q8K0S9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snapc1Q8K0S9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Snapc1Q8K0S9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snapc1Q8K0S9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.28■■□□□ 1
Snapc1Q8K0S9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snapc1Q8K0S9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Snapc1Q8K0S9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.26■□□□□ 0.99
Snapc1Q8K0S9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Snapc1Q8K0S9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Snapc1Q8K0S9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.26■□□□□ 0.99
Snapc1Q8K0S9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms