Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp28Q8CGV8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Mmp28Q8CGV8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp28Q8CGV8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp28Q8CGV8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp28Q8CGV8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.94■□□□□ 0.62
Mmp28Q8CGV8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp28Q8CGV8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp28Q8CGV8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.93■□□□□ 0.62
Mmp28Q8CGV8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp28Q8CGV8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp28Q8CGV8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp28Q8CGV8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp28Q8CGV8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp28Q8CGV8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp28Q8CGV8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp28Q8CGV8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.92■□□□□ 0.62
Mmp28Q8CGV8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp28Q8CGV8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp28Q8CGV8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp28Q8CGV8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp28Q8CGV8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp28Q8CGV8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp28Q8CGV8 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.9■□□□□ 0.62
Mmp28Q8CGV8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp28Q8CGV8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp28Q8CGV8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp28Q8CGV8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp28Q8CGV8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp28Q8CGV8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp28Q8CGV8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp28Q8CGV8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp28Q8CGV8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Mmp28Q8CGV8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Mmp28Q8CGV8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp28Q8CGV8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp28Q8CGV8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp28Q8CGV8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Mmp28Q8CGV8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp28Q8CGV8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Mmp28Q8CGV8 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.86■□□□□ 0.61
Mmp28Q8CGV8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp28Q8CGV8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.86■□□□□ 0.61
Mmp28Q8CGV8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp28Q8CGV8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp28Q8CGV8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp28Q8CGV8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp28Q8CGV8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp28Q8CGV8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp28Q8CGV8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp28Q8CGV8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp28Q8CGV8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp28Q8CGV8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp28Q8CGV8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Mmp28Q8CGV8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp28Q8CGV8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms