Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Rsph6aQ8CDR2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
Rsph6aQ8CDR2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rsph6aQ8CDR2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rsph6aQ8CDR2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rsph6aQ8CDR2 Gm7199-201ENSMUST00000118327 1485 ntBASIC29.52■■■□□ 2.32
Rsph6aQ8CDR2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rsph6aQ8CDR2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rsph6aQ8CDR2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC29.51■■■□□ 2.32
Rsph6aQ8CDR2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
Rsph6aQ8CDR2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rsph6aQ8CDR2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC29.5■■■□□ 2.31
Rsph6aQ8CDR2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rsph6aQ8CDR2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC29.5■■■□□ 2.31
Rsph6aQ8CDR2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rsph6aQ8CDR2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC29.49■■■□□ 2.31
Rsph6aQ8CDR2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC29.49■■■□□ 2.31
Rsph6aQ8CDR2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Rsph6aQ8CDR2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rsph6aQ8CDR2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rsph6aQ8CDR2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC29.48■■■□□ 2.31
Rsph6aQ8CDR2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rsph6aQ8CDR2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Rsph6aQ8CDR2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Rsph6aQ8CDR2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC29.47■■■□□ 2.31
Rsph6aQ8CDR2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rsph6aQ8CDR2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC29.46■■■□□ 2.31
Rsph6aQ8CDR2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rsph6aQ8CDR2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rsph6aQ8CDR2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
Rsph6aQ8CDR2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Rsph6aQ8CDR2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.45■■■□□ 2.31
Rsph6aQ8CDR2 Gm5812-201ENSMUST00000061073 957 ntBASIC29.45■■■□□ 2.31
Rsph6aQ8CDR2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
Rsph6aQ8CDR2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
Rsph6aQ8CDR2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Rsph6aQ8CDR2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rsph6aQ8CDR2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rsph6aQ8CDR2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rsph6aQ8CDR2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Rsph6aQ8CDR2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rsph6aQ8CDR2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Rsph6aQ8CDR2 Gm13238-201ENSMUST00000117655 780 ntBASIC29.42■■■□□ 2.3
Rsph6aQ8CDR2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
Rsph6aQ8CDR2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Rsph6aQ8CDR2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Rsph6aQ8CDR2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rsph6aQ8CDR2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rsph6aQ8CDR2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rsph6aQ8CDR2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Rsph6aQ8CDR2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rsph6aQ8CDR2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rsph6aQ8CDR2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
Rsph6aQ8CDR2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rsph6aQ8CDR2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rsph6aQ8CDR2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Rsph6aQ8CDR2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Rsph6aQ8CDR2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rsph6aQ8CDR2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Rsph6aQ8CDR2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Rsph6aQ8CDR2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Rsph6aQ8CDR2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rsph6aQ8CDR2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Rsph6aQ8CDR2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC29.37■■■□□ 2.29
Rsph6aQ8CDR2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
Rsph6aQ8CDR2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rsph6aQ8CDR2 Nsd1-203ENSMUST00000224156 1149 ntBASIC29.36■■■□□ 2.29
Rsph6aQ8CDR2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Rsph6aQ8CDR2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rsph6aQ8CDR2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rsph6aQ8CDR2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rsph6aQ8CDR2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rsph6aQ8CDR2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rsph6aQ8CDR2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Rsph6aQ8CDR2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
Rsph6aQ8CDR2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
Rsph6aQ8CDR2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Rsph6aQ8CDR2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Rsph6aQ8CDR2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Rsph6aQ8CDR2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Rsph6aQ8CDR2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Rsph6aQ8CDR2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
Rsph6aQ8CDR2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Rsph6aQ8CDR2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC29.33■■■□□ 2.29
Rsph6aQ8CDR2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC29.33■■■□□ 2.29
Rsph6aQ8CDR2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Rsph6aQ8CDR2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rsph6aQ8CDR2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rsph6aQ8CDR2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rsph6aQ8CDR2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rsph6aQ8CDR2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC29.3■■■□□ 2.28
Rsph6aQ8CDR2 Gm43566-201ENSMUST00000196851 808 ntBASIC29.3■■■□□ 2.28
Rsph6aQ8CDR2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC29.3■■■□□ 2.28
Rsph6aQ8CDR2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Rsph6aQ8CDR2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC29.29■■■□□ 2.28
Rsph6aQ8CDR2 Gm45444-201ENSMUST00000211394 898 ntBASIC29.29■■■□□ 2.28
Rsph6aQ8CDR2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Rsph6aQ8CDR2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rsph6aQ8CDR2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rsph6aQ8CDR2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms