Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC28.58■■■□□ 2.17
Ccdc60Q8C4J0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC28.57■■■□□ 2.16
Ccdc60Q8C4J0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ccdc60Q8C4J0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ccdc60Q8C4J0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC28.55■■■□□ 2.16
Ccdc60Q8C4J0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ccdc60Q8C4J0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ccdc60Q8C4J0 Gm44428-201ENSMUST00000204474 874 ntBASIC28.54■■■□□ 2.16
Ccdc60Q8C4J0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ccdc60Q8C4J0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Ccdc60Q8C4J0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ccdc60Q8C4J0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Ccdc60Q8C4J0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ccdc60Q8C4J0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ccdc60Q8C4J0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Ccdc60Q8C4J0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ccdc60Q8C4J0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Ccdc60Q8C4J0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC28.52■■■□□ 2.16
Ccdc60Q8C4J0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.16
Ccdc60Q8C4J0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ccdc60Q8C4J0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Ccdc60Q8C4J0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ccdc60Q8C4J0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.51■■■□□ 2.15
Ccdc60Q8C4J0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ccdc60Q8C4J0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ccdc60Q8C4J0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ccdc60Q8C4J0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ccdc60Q8C4J0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
Ccdc60Q8C4J0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Ccdc60Q8C4J0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC28.48■■■□□ 2.15
Ccdc60Q8C4J0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ccdc60Q8C4J0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Ccdc60Q8C4J0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ccdc60Q8C4J0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.47■■■□□ 2.15
Ccdc60Q8C4J0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ccdc60Q8C4J0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Ccdc60Q8C4J0 Gm7199-201ENSMUST00000118327 1485 ntBASIC28.46■■■□□ 2.15
Ccdc60Q8C4J0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Ccdc60Q8C4J0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ccdc60Q8C4J0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC28.46■■■□□ 2.15
Ccdc60Q8C4J0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Ccdc60Q8C4J0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Ccdc60Q8C4J0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ccdc60Q8C4J0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.44■■■□□ 2.14
Ccdc60Q8C4J0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ccdc60Q8C4J0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Ccdc60Q8C4J0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Ccdc60Q8C4J0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Gm12366-201ENSMUST00000121722 873 ntBASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Gm5786-201ENSMUST00000085368 882 ntBASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
Ccdc60Q8C4J0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ccdc60Q8C4J0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ccdc60Q8C4J0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ccdc60Q8C4J0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC28.42■■■□□ 2.14
Ccdc60Q8C4J0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Ccdc60Q8C4J0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ccdc60Q8C4J0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.41■■■□□ 2.14
Ccdc60Q8C4J0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ccdc60Q8C4J0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC28.41■■■□□ 2.14
Ccdc60Q8C4J0 Gm14523-201ENSMUST00000117260 558 ntBASIC28.4■■■□□ 2.14
Ccdc60Q8C4J0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ccdc60Q8C4J0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ccdc60Q8C4J0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ccdc60Q8C4J0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Ccdc60Q8C4J0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Ccdc60Q8C4J0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC28.39■■■□□ 2.13
Ccdc60Q8C4J0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ccdc60Q8C4J0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ccdc60Q8C4J0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Ccdc60Q8C4J0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Ccdc60Q8C4J0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ccdc60Q8C4J0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ccdc60Q8C4J0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.37■■■□□ 2.13
Ccdc60Q8C4J0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
Ccdc60Q8C4J0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ccdc60Q8C4J0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Ccdc60Q8C4J0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Ccdc60Q8C4J0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ccdc60Q8C4J0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ccdc60Q8C4J0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.36■■■□□ 2.13
Ccdc60Q8C4J0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ccdc60Q8C4J0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ccdc60Q8C4J0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ccdc60Q8C4J0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms