Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3rf2Q8BZT2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Sh3rf2Q8BZT2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3rf2Q8BZT2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Sh3rf2Q8BZT2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf2Q8BZT2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf2Q8BZT2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf2Q8BZT2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf2Q8BZT2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Sh3rf2Q8BZT2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf2Q8BZT2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf2Q8BZT2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.73■■□□□ 1.23
Sh3rf2Q8BZT2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Sh3rf2Q8BZT2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.73■■□□□ 1.23
Sh3rf2Q8BZT2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sh3rf2Q8BZT2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf2Q8BZT2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.71■■□□□ 1.23
Sh3rf2Q8BZT2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Sh3rf2Q8BZT2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.71■■□□□ 1.23
Sh3rf2Q8BZT2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Sh3rf2Q8BZT2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf2Q8BZT2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Sh3rf2Q8BZT2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf2Q8BZT2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf2Q8BZT2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf2Q8BZT2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf2Q8BZT2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.69■■□□□ 1.22
Sh3rf2Q8BZT2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf2Q8BZT2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf2Q8BZT2 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.69■■□□□ 1.22
Sh3rf2Q8BZT2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf2Q8BZT2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3rf2Q8BZT2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Sh3rf2Q8BZT2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3rf2Q8BZT2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3rf2Q8BZT2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3rf2Q8BZT2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.68■■□□□ 1.22
Sh3rf2Q8BZT2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.68■■□□□ 1.22
Sh3rf2Q8BZT2 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.68■■□□□ 1.22
Sh3rf2Q8BZT2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Sh3rf2Q8BZT2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sh3rf2Q8BZT2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3rf2Q8BZT2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3rf2Q8BZT2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3rf2Q8BZT2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3rf2Q8BZT2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf2Q8BZT2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.65■■□□□ 1.22
Sh3rf2Q8BZT2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Sh3rf2Q8BZT2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3rf2Q8BZT2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.65■■□□□ 1.22
Sh3rf2Q8BZT2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Sh3rf2Q8BZT2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Sh3rf2Q8BZT2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sh3rf2Q8BZT2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3rf2Q8BZT2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3rf2Q8BZT2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Sh3rf2Q8BZT2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Sh3rf2Q8BZT2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.63■■□□□ 1.21
Sh3rf2Q8BZT2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3rf2Q8BZT2 Gm13238-201ENSMUST00000117655 780 ntBASIC22.63■■□□□ 1.21
Sh3rf2Q8BZT2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3rf2Q8BZT2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3rf2Q8BZT2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3rf2Q8BZT2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Sh3rf2Q8BZT2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Sh3rf2Q8BZT2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.62■■□□□ 1.21
Sh3rf2Q8BZT2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Sh3rf2Q8BZT2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3rf2Q8BZT2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3rf2Q8BZT2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
Sh3rf2Q8BZT2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3rf2Q8BZT2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.61■■□□□ 1.21
Sh3rf2Q8BZT2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3rf2Q8BZT2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Gm15546-201ENSMUST00000122095 826 ntBASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Gm43566-201ENSMUST00000196851 808 ntBASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Gm45444-201ENSMUST00000211394 898 ntBASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms