Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cpsf7Q8BTV2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.36■■□□□ 1.17
Cpsf7Q8BTV2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cpsf7Q8BTV2 Gm37136-201ENSMUST00000194368 194 ntBASIC22.36■■□□□ 1.17
Cpsf7Q8BTV2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpsf7Q8BTV2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cpsf7Q8BTV2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpsf7Q8BTV2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpsf7Q8BTV2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpsf7Q8BTV2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Cpsf7Q8BTV2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpsf7Q8BTV2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpsf7Q8BTV2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpsf7Q8BTV2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpsf7Q8BTV2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.34■■□□□ 1.17
Cpsf7Q8BTV2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.34■■□□□ 1.17
Cpsf7Q8BTV2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpsf7Q8BTV2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpsf7Q8BTV2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Cpsf7Q8BTV2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cpsf7Q8BTV2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.33■■□□□ 1.17
Cpsf7Q8BTV2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cpsf7Q8BTV2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Cpsf7Q8BTV2 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.31■■□□□ 1.16
Cpsf7Q8BTV2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cpsf7Q8BTV2 Gm6821-201ENSMUST00000107540 542 ntBASIC22.31■■□□□ 1.16
Cpsf7Q8BTV2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cpsf7Q8BTV2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpsf7Q8BTV2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.3■■□□□ 1.16
Cpsf7Q8BTV2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf7Q8BTV2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf7Q8BTV2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.3■■□□□ 1.16
Cpsf7Q8BTV2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf7Q8BTV2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf7Q8BTV2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf7Q8BTV2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf7Q8BTV2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Cpsf7Q8BTV2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.27■■□□□ 1.16
Cpsf7Q8BTV2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf7Q8BTV2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.26■■□□□ 1.15
Cpsf7Q8BTV2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf7Q8BTV2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf7Q8BTV2 Gm8503-201ENSMUST00000118131 455 ntBASIC22.26■■□□□ 1.15
Cpsf7Q8BTV2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Cpsf7Q8BTV2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf7Q8BTV2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Cpsf7Q8BTV2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpsf7Q8BTV2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpsf7Q8BTV2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpsf7Q8BTV2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.24■■□□□ 1.15
Cpsf7Q8BTV2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpsf7Q8BTV2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cpsf7Q8BTV2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpsf7Q8BTV2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cpsf7Q8BTV2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cpsf7Q8BTV2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cpsf7Q8BTV2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Cpsf7Q8BTV2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.23■■□□□ 1.15
Cpsf7Q8BTV2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Cpsf7Q8BTV2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpsf7Q8BTV2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpsf7Q8BTV2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpsf7Q8BTV2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpsf7Q8BTV2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpsf7Q8BTV2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.21■■□□□ 1.15
Cpsf7Q8BTV2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cpsf7Q8BTV2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cpsf7Q8BTV2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cpsf7Q8BTV2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpsf7Q8BTV2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpsf7Q8BTV2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpsf7Q8BTV2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Cpsf7Q8BTV2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpsf7Q8BTV2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Cpsf7Q8BTV2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cpsf7Q8BTV2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cpsf7Q8BTV2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cpsf7Q8BTV2 Nkain2-201ENSMUST00000092602 558 ntBASIC22.17■■□□□ 1.14
Cpsf7Q8BTV2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cpsf7Q8BTV2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cpsf7Q8BTV2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.16■■□□□ 1.14
Cpsf7Q8BTV2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cpsf7Q8BTV2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cpsf7Q8BTV2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cpsf7Q8BTV2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cpsf7Q8BTV2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Cpsf7Q8BTV2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.14■■□□□ 1.13
Cpsf7Q8BTV2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Cpsf7Q8BTV2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cpsf7Q8BTV2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cpsf7Q8BTV2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Cpsf7Q8BTV2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms