Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Scfd1Q8BRF7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.83■■□□□ 1.73
Scfd1Q8BRF7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Scfd1Q8BRF7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.81■■□□□ 1.72
Scfd1Q8BRF7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Scfd1Q8BRF7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Scfd1Q8BRF7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
Scfd1Q8BRF7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Scfd1Q8BRF7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Scfd1Q8BRF7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
Scfd1Q8BRF7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.8■■□□□ 1.72
Scfd1Q8BRF7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Scfd1Q8BRF7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Scfd1Q8BRF7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Scfd1Q8BRF7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Scfd1Q8BRF7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Scfd1Q8BRF7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.79■■□□□ 1.72
Scfd1Q8BRF7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Scfd1Q8BRF7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Gm5812-201ENSMUST00000061073 957 ntBASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scfd1Q8BRF7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Scfd1Q8BRF7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Scfd1Q8BRF7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.77■■□□□ 1.72
Scfd1Q8BRF7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Scfd1Q8BRF7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Scfd1Q8BRF7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Scfd1Q8BRF7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.75■■□□□ 1.71
Scfd1Q8BRF7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Scfd1Q8BRF7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Scfd1Q8BRF7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.75■■□□□ 1.71
Scfd1Q8BRF7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.75■■□□□ 1.71
Scfd1Q8BRF7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scfd1Q8BRF7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Scfd1Q8BRF7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Scfd1Q8BRF7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Scfd1Q8BRF7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Scfd1Q8BRF7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scfd1Q8BRF7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scfd1Q8BRF7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Scfd1Q8BRF7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Scfd1Q8BRF7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Scfd1Q8BRF7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Scfd1Q8BRF7 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.72■■□□□ 1.71
Scfd1Q8BRF7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Scfd1Q8BRF7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Scfd1Q8BRF7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Scfd1Q8BRF7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Scfd1Q8BRF7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Scfd1Q8BRF7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.7
Scfd1Q8BRF7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.7■■□□□ 1.7
Scfd1Q8BRF7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scfd1Q8BRF7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Scfd1Q8BRF7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scfd1Q8BRF7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Scfd1Q8BRF7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Scfd1Q8BRF7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.69■■□□□ 1.7
Scfd1Q8BRF7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
Scfd1Q8BRF7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Scfd1Q8BRF7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Scfd1Q8BRF7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Scfd1Q8BRF7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Scfd1Q8BRF7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scfd1Q8BRF7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.68■■□□□ 1.7
Scfd1Q8BRF7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scfd1Q8BRF7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scfd1Q8BRF7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scfd1Q8BRF7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scfd1Q8BRF7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Scfd1Q8BRF7 Gm13238-201ENSMUST00000117655 780 ntBASIC25.67■■□□□ 1.7
Scfd1Q8BRF7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Scfd1Q8BRF7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Scfd1Q8BRF7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Scfd1Q8BRF7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Scfd1Q8BRF7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Scfd1Q8BRF7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.66■■□□□ 1.7
Scfd1Q8BRF7 Gm43566-201ENSMUST00000196851 808 ntBASIC25.66■■□□□ 1.7
Scfd1Q8BRF7 Gm45444-201ENSMUST00000211394 898 ntBASIC25.66■■□□□ 1.7
Scfd1Q8BRF7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scfd1Q8BRF7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Scfd1Q8BRF7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Scfd1Q8BRF7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Scfd1Q8BRF7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Scfd1Q8BRF7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Scfd1Q8BRF7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.62■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms