Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf18Q8BM39 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf18Q8BM39 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Prpf18Q8BM39 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf18Q8BM39 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Prpf18Q8BM39 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf18Q8BM39 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf18Q8BM39 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.04■□□□□ 0.96
Prpf18Q8BM39 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf18Q8BM39 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf18Q8BM39 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf18Q8BM39 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf18Q8BM39 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf18Q8BM39 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Prpf18Q8BM39 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.02■□□□□ 0.95
Prpf18Q8BM39 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Prpf18Q8BM39 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf18Q8BM39 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf18Q8BM39 Gm42809-201ENSMUST00000198429 1138 ntBASIC21■□□□□ 0.95
Prpf18Q8BM39 Gm6277-202ENSMUST00000224036 2779 ntBASIC21■□□□□ 0.95
Prpf18Q8BM39 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prpf18Q8BM39 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf18Q8BM39 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Gm6821-201ENSMUST00000107540 542 ntBASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.97■□□□□ 0.95
Prpf18Q8BM39 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms