Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpp38Q80UU2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rpp38Q80UU2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.43■■□□□ 1.18
Rpp38Q80UU2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.43■■□□□ 1.18
Rpp38Q80UU2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpp38Q80UU2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Rpp38Q80UU2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpp38Q80UU2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp38Q80UU2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp38Q80UU2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.42■■□□□ 1.18
Rpp38Q80UU2 Gm44428-201ENSMUST00000204474 874 ntBASIC22.42■■□□□ 1.18
Rpp38Q80UU2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp38Q80UU2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp38Q80UU2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpp38Q80UU2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpp38Q80UU2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Rpp38Q80UU2 Gm11687-201ENSMUST00000118911 886 ntBASIC22.41■■□□□ 1.18
Rpp38Q80UU2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.41■■□□□ 1.18
Rpp38Q80UU2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpp38Q80UU2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp38Q80UU2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp38Q80UU2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp38Q80UU2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp38Q80UU2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.39■■□□□ 1.17
Rpp38Q80UU2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Rpp38Q80UU2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpp38Q80UU2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.38■■□□□ 1.17
Rpp38Q80UU2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpp38Q80UU2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rpp38Q80UU2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpp38Q80UU2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
Rpp38Q80UU2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rpp38Q80UU2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rpp38Q80UU2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rpp38Q80UU2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rpp38Q80UU2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rpp38Q80UU2 Gm11175-201ENSMUST00000116172 543 ntBASIC22.36■■□□□ 1.17
Rpp38Q80UU2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rpp38Q80UU2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rpp38Q80UU2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.35■■□□□ 1.17
Rpp38Q80UU2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpp38Q80UU2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpp38Q80UU2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Rpp38Q80UU2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.35■■□□□ 1.17
Rpp38Q80UU2 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.35■■□□□ 1.17
Rpp38Q80UU2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Rpp38Q80UU2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpp38Q80UU2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpp38Q80UU2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.34■■□□□ 1.17
Rpp38Q80UU2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Rpp38Q80UU2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpp38Q80UU2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rpp38Q80UU2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rpp38Q80UU2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rpp38Q80UU2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpp38Q80UU2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Rpp38Q80UU2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpp38Q80UU2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rpp38Q80UU2 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.32■■□□□ 1.16
Rpp38Q80UU2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.32■■□□□ 1.16
Rpp38Q80UU2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rpp38Q80UU2 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.32■■□□□ 1.16
Rpp38Q80UU2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpp38Q80UU2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Rpp38Q80UU2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rpp38Q80UU2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.31■■□□□ 1.16
Rpp38Q80UU2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rpp38Q80UU2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rpp38Q80UU2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rpp38Q80UU2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.3■■□□□ 1.16
Rpp38Q80UU2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rpp38Q80UU2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rpp38Q80UU2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.3■■□□□ 1.16
Rpp38Q80UU2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rpp38Q80UU2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rpp38Q80UU2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rpp38Q80UU2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp38Q80UU2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp38Q80UU2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp38Q80UU2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Rpp38Q80UU2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp38Q80UU2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp38Q80UU2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp38Q80UU2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rpp38Q80UU2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.27■■□□□ 1.16
Rpp38Q80UU2 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.27■■□□□ 1.16
Rpp38Q80UU2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Rpp38Q80UU2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rpp38Q80UU2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rpp38Q80UU2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp38Q80UU2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp38Q80UU2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Rpp38Q80UU2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rpp38Q80UU2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp38Q80UU2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp38Q80UU2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rpp38Q80UU2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rpp38Q80UU2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rpp38Q80UU2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Rpp38Q80UU2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms