Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Snrnp200Q6P4T2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Snrnp200Q6P4T2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.34■■□□□ 1.01
Snrnp200Q6P4T2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Snrnp200Q6P4T2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Snrnp200Q6P4T2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Snrnp200Q6P4T2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Snrnp200Q6P4T2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp200Q6P4T2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Snrnp200Q6P4T2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Snrnp200Q6P4T2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp200Q6P4T2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp200Q6P4T2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp200Q6P4T2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Snrnp200Q6P4T2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.3■■□□□ 1
Snrnp200Q6P4T2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Snrnp200Q6P4T2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp200Q6P4T2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp200Q6P4T2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp200Q6P4T2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp200Q6P4T2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.29■■□□□ 1
Snrnp200Q6P4T2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snrnp200Q6P4T2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Snrnp200Q6P4T2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Snrnp200Q6P4T2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snrnp200Q6P4T2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.28■■□□□ 1
Snrnp200Q6P4T2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp200Q6P4T2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snrnp200Q6P4T2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Snrnp200Q6P4T2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Snrnp200Q6P4T2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.27■■□□□ 1
Snrnp200Q6P4T2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.27■■□□□ 1
Snrnp200Q6P4T2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Snrnp200Q6P4T2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Snrnp200Q6P4T2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.26■□□□□ 0.99
Snrnp200Q6P4T2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snrnp200Q6P4T2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snrnp200Q6P4T2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Snrnp200Q6P4T2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snrnp200Q6P4T2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Snrnp200Q6P4T2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.25■□□□□ 0.99
Snrnp200Q6P4T2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.25■□□□□ 0.99
Snrnp200Q6P4T2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snrnp200Q6P4T2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snrnp200Q6P4T2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Snrnp200Q6P4T2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrnp200Q6P4T2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.23■□□□□ 0.99
Snrnp200Q6P4T2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrnp200Q6P4T2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snrnp200Q6P4T2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snrnp200Q6P4T2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Snrnp200Q6P4T2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp200Q6P4T2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp200Q6P4T2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Snrnp200Q6P4T2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Snrnp200Q6P4T2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Snrnp200Q6P4T2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp200Q6P4T2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp200Q6P4T2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.2■□□□□ 0.98
Snrnp200Q6P4T2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Snrnp200Q6P4T2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp200Q6P4T2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp200Q6P4T2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Snrnp200Q6P4T2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.2■□□□□ 0.98
Snrnp200Q6P4T2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp200Q6P4T2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp200Q6P4T2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp200Q6P4T2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp200Q6P4T2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.19■□□□□ 0.98
Snrnp200Q6P4T2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp200Q6P4T2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snrnp200Q6P4T2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp200Q6P4T2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp200Q6P4T2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp200Q6P4T2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp200Q6P4T2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp200Q6P4T2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp200Q6P4T2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.17■□□□□ 0.98
Snrnp200Q6P4T2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snrnp200Q6P4T2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Snrnp200Q6P4T2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Snrnp200Q6P4T2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Snrnp200Q6P4T2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Snrnp200Q6P4T2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.16■□□□□ 0.98
Snrnp200Q6P4T2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Snrnp200Q6P4T2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snrnp200Q6P4T2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snrnp200Q6P4T2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snrnp200Q6P4T2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snrnp200Q6P4T2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.15■□□□□ 0.98
Snrnp200Q6P4T2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snrnp200Q6P4T2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms