Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VcanQ62059 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VcanQ62059 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.62■■□□□ 1.05
VcanQ62059 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.62■■□□□ 1.05
VcanQ62059 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VcanQ62059 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.62■■□□□ 1.05
VcanQ62059 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
VcanQ62059 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VcanQ62059 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
VcanQ62059 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VcanQ62059 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VcanQ62059 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VcanQ62059 Gm8495-201ENSMUST00000188740 694 ntBASIC21.59■■□□□ 1.05
VcanQ62059 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.59■■□□□ 1.05
VcanQ62059 Gm9847-201ENSMUST00000052528 599 ntBASIC21.59■■□□□ 1.05
VcanQ62059 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VcanQ62059 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VcanQ62059 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VcanQ62059 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.58■■□□□ 1.04
VcanQ62059 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VcanQ62059 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VcanQ62059 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VcanQ62059 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.57■■□□□ 1.04
VcanQ62059 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.57■■□□□ 1.04
VcanQ62059 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VcanQ62059 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.57■■□□□ 1.04
VcanQ62059 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VcanQ62059 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
VcanQ62059 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VcanQ62059 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.56■■□□□ 1.04
VcanQ62059 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VcanQ62059 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VcanQ62059 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VcanQ62059 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VcanQ62059 Gm44428-201ENSMUST00000204474 874 ntBASIC21.54■■□□□ 1.04
VcanQ62059 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VcanQ62059 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VcanQ62059 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
VcanQ62059 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VcanQ62059 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VcanQ62059 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VcanQ62059 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VcanQ62059 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.53■■□□□ 1.04
VcanQ62059 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VcanQ62059 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.53■■□□□ 1.04
VcanQ62059 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VcanQ62059 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.52■■□□□ 1.04
VcanQ62059 Gm27454-201ENSMUST00000185090 204 ntBASIC21.52■■□□□ 1.04
VcanQ62059 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VcanQ62059 Terc-201ENSMUST00000082862 423 ntBASIC21.51■■□□□ 1.03
VcanQ62059 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VcanQ62059 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VcanQ62059 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VcanQ62059 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.5■■□□□ 1.03
VcanQ62059 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
VcanQ62059 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.5■■□□□ 1.03
VcanQ62059 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VcanQ62059 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.49■■□□□ 1.03
VcanQ62059 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VcanQ62059 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VcanQ62059 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
VcanQ62059 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.49■■□□□ 1.03
VcanQ62059 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
VcanQ62059 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
VcanQ62059 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
VcanQ62059 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VcanQ62059 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VcanQ62059 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VcanQ62059 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
VcanQ62059 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VcanQ62059 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
VcanQ62059 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VcanQ62059 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.45■■□□□ 1.02
VcanQ62059 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
VcanQ62059 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.45■■□□□ 1.02
VcanQ62059 Zxda-201ENSMUST00000117281 2621 ntBASIC21.45■■□□□ 1.02
VcanQ62059 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VcanQ62059 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VcanQ62059 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VcanQ62059 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
VcanQ62059 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VcanQ62059 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VcanQ62059 Gm12821-201ENSMUST00000120022 600 ntBASIC21.44■■□□□ 1.02
VcanQ62059 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.44■■□□□ 1.02
VcanQ62059 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.44■■□□□ 1.02
VcanQ62059 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VcanQ62059 Gm12922-201ENSMUST00000120626 809 ntBASIC21.43■■□□□ 1.02
VcanQ62059 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
VcanQ62059 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VcanQ62059 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
VcanQ62059 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.42■■□□□ 1.02
VcanQ62059 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
VcanQ62059 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
VcanQ62059 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
VcanQ62059 Gm18284-201ENSMUST00000172604 624 ntBASIC21.42■■□□□ 1.02
VcanQ62059 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
VcanQ62059 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
VcanQ62059 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
VcanQ62059 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
VcanQ62059 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms