Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clns1aQ61189 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clns1aQ61189 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Clns1aQ61189 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clns1aQ61189 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clns1aQ61189 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clns1aQ61189 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clns1aQ61189 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clns1aQ61189 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clns1aQ61189 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clns1aQ61189 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clns1aQ61189 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.03■□□□□ 0.64
Clns1aQ61189 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clns1aQ61189 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clns1aQ61189 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clns1aQ61189 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Clns1aQ61189 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clns1aQ61189 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clns1aQ61189 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clns1aQ61189 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clns1aQ61189 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clns1aQ61189 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.02■□□□□ 0.64
Clns1aQ61189 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Clns1aQ61189 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Clns1aQ61189 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clns1aQ61189 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Clns1aQ61189 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clns1aQ61189 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clns1aQ61189 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clns1aQ61189 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.01■□□□□ 0.63
Clns1aQ61189 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clns1aQ61189 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.01■□□□□ 0.63
Clns1aQ61189 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clns1aQ61189 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clns1aQ61189 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19■□□□□ 0.63
Clns1aQ61189 Gm6934-201ENSMUST00000194780 1905 ntBASIC19■□□□□ 0.63
Clns1aQ61189 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clns1aQ61189 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19■□□□□ 0.63
Clns1aQ61189 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Clns1aQ61189 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clns1aQ61189 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clns1aQ61189 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clns1aQ61189 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Clns1aQ61189 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clns1aQ61189 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clns1aQ61189 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clns1aQ61189 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clns1aQ61189 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clns1aQ61189 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clns1aQ61189 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clns1aQ61189 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clns1aQ61189 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Clns1aQ61189 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clns1aQ61189 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clns1aQ61189 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.97■□□□□ 0.63
Clns1aQ61189 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clns1aQ61189 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.97■□□□□ 0.63
Clns1aQ61189 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clns1aQ61189 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clns1aQ61189 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clns1aQ61189 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.96■□□□□ 0.63
Clns1aQ61189 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clns1aQ61189 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.96■□□□□ 0.63
Clns1aQ61189 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clns1aQ61189 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clns1aQ61189 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clns1aQ61189 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Clns1aQ61189 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clns1aQ61189 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Clns1aQ61189 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.95■□□□□ 0.62
Clns1aQ61189 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clns1aQ61189 Zfp131-205ENSMUST00000223812 663 ntBASIC18.94■□□□□ 0.62
Clns1aQ61189 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clns1aQ61189 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Clns1aQ61189 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clns1aQ61189 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clns1aQ61189 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clns1aQ61189 Gm24970-201ENSMUST00000175582 82 ntBASIC18.93■□□□□ 0.62
Clns1aQ61189 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clns1aQ61189 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.93■□□□□ 0.62
Clns1aQ61189 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clns1aQ61189 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Clns1aQ61189 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clns1aQ61189 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clns1aQ61189 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clns1aQ61189 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clns1aQ61189 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clns1aQ61189 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.92■□□□□ 0.62
Clns1aQ61189 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clns1aQ61189 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Clns1aQ61189 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clns1aQ61189 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.91■□□□□ 0.62
Clns1aQ61189 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.91■□□□□ 0.62
Clns1aQ61189 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Clns1aQ61189 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clns1aQ61189 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clns1aQ61189 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Clns1aQ61189 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Clns1aQ61189 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clns1aQ61189 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms