Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Shroom1Q5SX79 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Shroom1Q5SX79 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Shroom1Q5SX79 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom1Q5SX79 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom1Q5SX79 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom1Q5SX79 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Shroom1Q5SX79 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom1Q5SX79 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom1Q5SX79 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.75■■□□□ 1.39
Shroom1Q5SX79 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom1Q5SX79 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom1Q5SX79 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom1Q5SX79 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom1Q5SX79 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom1Q5SX79 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom1Q5SX79 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Shroom1Q5SX79 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom1Q5SX79 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
Shroom1Q5SX79 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom1Q5SX79 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom1Q5SX79 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom1Q5SX79 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom1Q5SX79 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom1Q5SX79 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom1Q5SX79 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom1Q5SX79 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom1Q5SX79 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Shroom1Q5SX79 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom1Q5SX79 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom1Q5SX79 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Shroom1Q5SX79 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.7■■□□□ 1.39
Shroom1Q5SX79 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom1Q5SX79 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom1Q5SX79 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.7■■□□□ 1.38
Shroom1Q5SX79 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom1Q5SX79 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom1Q5SX79 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shroom1Q5SX79 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.69■■□□□ 1.38
Shroom1Q5SX79 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shroom1Q5SX79 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shroom1Q5SX79 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shroom1Q5SX79 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shroom1Q5SX79 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Shroom1Q5SX79 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Shroom1Q5SX79 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.68■■□□□ 1.38
Shroom1Q5SX79 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.68■■□□□ 1.38
Shroom1Q5SX79 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Shroom1Q5SX79 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.67■■□□□ 1.38
Shroom1Q5SX79 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shroom1Q5SX79 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Shroom1Q5SX79 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Shroom1Q5SX79 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Shroom1Q5SX79 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shroom1Q5SX79 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Shroom1Q5SX79 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Shroom1Q5SX79 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shroom1Q5SX79 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Shroom1Q5SX79 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Shroom1Q5SX79 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Shroom1Q5SX79 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Shroom1Q5SX79 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Shroom1Q5SX79 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Shroom1Q5SX79 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Shroom1Q5SX79 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shroom1Q5SX79 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shroom1Q5SX79 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Shroom1Q5SX79 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.63■■□□□ 1.37
Shroom1Q5SX79 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom1Q5SX79 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Shroom1Q5SX79 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom1Q5SX79 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom1Q5SX79 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom1Q5SX79 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Shroom1Q5SX79 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom1Q5SX79 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom1Q5SX79 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.61■■□□□ 1.37
Shroom1Q5SX79 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom1Q5SX79 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.61■■□□□ 1.37
Shroom1Q5SX79 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Shroom1Q5SX79 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom1Q5SX79 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.59■■□□□ 1.37
Shroom1Q5SX79 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom1Q5SX79 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Shroom1Q5SX79 Gm15546-201ENSMUST00000122095 826 ntBASIC23.59■■□□□ 1.37
Shroom1Q5SX79 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom1Q5SX79 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom1Q5SX79 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom1Q5SX79 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom1Q5SX79 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.58■■□□□ 1.36
Shroom1Q5SX79 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
Shroom1Q5SX79 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shroom1Q5SX79 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shroom1Q5SX79 Gm43566-201ENSMUST00000196851 808 ntBASIC23.57■■□□□ 1.36
Shroom1Q5SX79 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom1Q5SX79 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom1Q5SX79 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.56■■□□□ 1.36
Shroom1Q5SX79 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Shroom1Q5SX79 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Shroom1Q5SX79 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 124.2 ms