Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav3-3Q5R1C3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav3-3Q5R1C3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav3-3Q5R1C3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3-3Q5R1C3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3-3Q5R1C3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3-3Q5R1C3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3-3Q5R1C3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3-3Q5R1C3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3-3Q5R1C3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.64■□□□□ 0.26
Trav3-3Q5R1C3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav3-3Q5R1C3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3-3Q5R1C3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3-3Q5R1C3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav3-3Q5R1C3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3-3Q5R1C3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trav3-3Q5R1C3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3-3Q5R1C3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3-3Q5R1C3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3-3Q5R1C3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3-3Q5R1C3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3-3Q5R1C3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav3-3Q5R1C3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3-3Q5R1C3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3-3Q5R1C3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav3-3Q5R1C3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav3-3Q5R1C3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3-3Q5R1C3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3-3Q5R1C3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav3-3Q5R1C3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav3-3Q5R1C3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3-3Q5R1C3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3-3Q5R1C3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3-3Q5R1C3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav3-3Q5R1C3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav3-3Q5R1C3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3-3Q5R1C3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav3-3Q5R1C3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav3-3Q5R1C3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav3-3Q5R1C3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav3-3Q5R1C3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav3-3Q5R1C3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
Trav3-3Q5R1C3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav3-3Q5R1C3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav3-3Q5R1C3 Iqck-206ENSMUST00000208658 2891 ntBASIC16.58■□□□□ 0.24
Trav3-3Q5R1C3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3-3Q5R1C3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-3Q5R1C3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav3-3Q5R1C3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3-3Q5R1C3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3-3Q5R1C3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3-3Q5R1C3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav3-3Q5R1C3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3-3Q5R1C3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3-3Q5R1C3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav3-3Q5R1C3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3-3Q5R1C3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3-3Q5R1C3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav3-3Q5R1C3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav3-3Q5R1C3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3-3Q5R1C3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3-3Q5R1C3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav3-3Q5R1C3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav3-3Q5R1C3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav3-3Q5R1C3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav3-3Q5R1C3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav3-3Q5R1C3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav3-3Q5R1C3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav3-3Q5R1C3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav3-3Q5R1C3 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.52■□□□□ 0.23
Trav3-3Q5R1C3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav3-3Q5R1C3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav3-3Q5R1C3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav3-3Q5R1C3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav3-3Q5R1C3 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms