Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
R3hdm4Q4VBF2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.23■■□□□ 1.47
R3hdm4Q4VBF2 Gm44428-201ENSMUST00000204474 874 ntBASIC24.23■■□□□ 1.47
R3hdm4Q4VBF2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
R3hdm4Q4VBF2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.23■■□□□ 1.47
R3hdm4Q4VBF2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
R3hdm4Q4VBF2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
R3hdm4Q4VBF2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.22■■□□□ 1.47
R3hdm4Q4VBF2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
R3hdm4Q4VBF2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
R3hdm4Q4VBF2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
R3hdm4Q4VBF2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
R3hdm4Q4VBF2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
R3hdm4Q4VBF2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
R3hdm4Q4VBF2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
R3hdm4Q4VBF2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Gm12366-201ENSMUST00000121722 873 ntBASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Gm5786-201ENSMUST00000085368 882 ntBASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
R3hdm4Q4VBF2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
R3hdm4Q4VBF2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
R3hdm4Q4VBF2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
R3hdm4Q4VBF2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
R3hdm4Q4VBF2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.19■■□□□ 1.46
R3hdm4Q4VBF2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
R3hdm4Q4VBF2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.19■■□□□ 1.46
R3hdm4Q4VBF2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
R3hdm4Q4VBF2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
R3hdm4Q4VBF2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.18■■□□□ 1.46
R3hdm4Q4VBF2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.17■■□□□ 1.46
R3hdm4Q4VBF2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
R3hdm4Q4VBF2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
R3hdm4Q4VBF2 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.17■■□□□ 1.46
R3hdm4Q4VBF2 Cap2-205ENSMUST00000225824 1634 ntBASIC24.17■■□□□ 1.46
R3hdm4Q4VBF2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
R3hdm4Q4VBF2 Gm14523-201ENSMUST00000117260 558 ntBASIC24.16■■□□□ 1.46
R3hdm4Q4VBF2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
R3hdm4Q4VBF2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
R3hdm4Q4VBF2 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.15■■□□□ 1.46
R3hdm4Q4VBF2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
R3hdm4Q4VBF2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
R3hdm4Q4VBF2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.14■■□□□ 1.45
R3hdm4Q4VBF2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
R3hdm4Q4VBF2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
R3hdm4Q4VBF2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
R3hdm4Q4VBF2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
R3hdm4Q4VBF2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
R3hdm4Q4VBF2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
R3hdm4Q4VBF2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
R3hdm4Q4VBF2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.12■■□□□ 1.45
R3hdm4Q4VBF2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
R3hdm4Q4VBF2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.1■■□□□ 1.45
R3hdm4Q4VBF2 Gm7332-201ENSMUST00000118351 454 ntBASIC24.1■■□□□ 1.45
R3hdm4Q4VBF2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
R3hdm4Q4VBF2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
R3hdm4Q4VBF2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
R3hdm4Q4VBF2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
R3hdm4Q4VBF2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.08■■□□□ 1.45
R3hdm4Q4VBF2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
R3hdm4Q4VBF2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
R3hdm4Q4VBF2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.07■■□□□ 1.44
R3hdm4Q4VBF2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
R3hdm4Q4VBF2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
R3hdm4Q4VBF2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.07■■□□□ 1.44
R3hdm4Q4VBF2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.07■■□□□ 1.44
R3hdm4Q4VBF2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
R3hdm4Q4VBF2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
R3hdm4Q4VBF2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
R3hdm4Q4VBF2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
R3hdm4Q4VBF2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
R3hdm4Q4VBF2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
R3hdm4Q4VBF2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
R3hdm4Q4VBF2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.04■■□□□ 1.44
R3hdm4Q4VBF2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
R3hdm4Q4VBF2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
R3hdm4Q4VBF2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms