Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Khdc4Q3TCX3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Khdc4Q3TCX3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc4Q3TCX3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc4Q3TCX3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Khdc4Q3TCX3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc4Q3TCX3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.11■□□□□ 0.97
Khdc4Q3TCX3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc4Q3TCX3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Khdc4Q3TCX3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Khdc4Q3TCX3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc4Q3TCX3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc4Q3TCX3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc4Q3TCX3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc4Q3TCX3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Khdc4Q3TCX3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Khdc4Q3TCX3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Khdc4Q3TCX3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Khdc4Q3TCX3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Khdc4Q3TCX3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.08■□□□□ 0.97
Khdc4Q3TCX3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Khdc4Q3TCX3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Khdc4Q3TCX3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Khdc4Q3TCX3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Khdc4Q3TCX3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Khdc4Q3TCX3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Khdc4Q3TCX3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Khdc4Q3TCX3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Khdc4Q3TCX3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Khdc4Q3TCX3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.06■□□□□ 0.96
Khdc4Q3TCX3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Khdc4Q3TCX3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
Khdc4Q3TCX3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Khdc4Q3TCX3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Khdc4Q3TCX3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Khdc4Q3TCX3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Khdc4Q3TCX3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc4Q3TCX3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc4Q3TCX3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.03■□□□□ 0.96
Khdc4Q3TCX3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc4Q3TCX3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Khdc4Q3TCX3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc4Q3TCX3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc4Q3TCX3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Khdc4Q3TCX3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Khdc4Q3TCX3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Khdc4Q3TCX3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Khdc4Q3TCX3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Khdc4Q3TCX3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Khdc4Q3TCX3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Khdc4Q3TCX3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Khdc4Q3TCX3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Khdc4Q3TCX3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Khdc4Q3TCX3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Khdc4Q3TCX3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Khdc4Q3TCX3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Khdc4Q3TCX3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc4Q3TCX3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc4Q3TCX3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc4Q3TCX3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc4Q3TCX3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Khdc4Q3TCX3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Khdc4Q3TCX3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.98■□□□□ 0.95
Khdc4Q3TCX3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Khdc4Q3TCX3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Khdc4Q3TCX3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Khdc4Q3TCX3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Khdc4Q3TCX3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.97■□□□□ 0.95
Khdc4Q3TCX3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Khdc4Q3TCX3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Khdc4Q3TCX3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.96■□□□□ 0.95
Khdc4Q3TCX3 Gm44428-201ENSMUST00000204474 874 ntBASIC20.96■□□□□ 0.95
Khdc4Q3TCX3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdc4Q3TCX3 Gm5921-201ENSMUST00000075898 882 ntBASIC20.96■□□□□ 0.95
Khdc4Q3TCX3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdc4Q3TCX3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.95■□□□□ 0.94
Khdc4Q3TCX3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Khdc4Q3TCX3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Khdc4Q3TCX3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Khdc4Q3TCX3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.94■□□□□ 0.94
Khdc4Q3TCX3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
Khdc4Q3TCX3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdc4Q3TCX3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdc4Q3TCX3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdc4Q3TCX3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Khdc4Q3TCX3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Khdc4Q3TCX3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Khdc4Q3TCX3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Khdc4Q3TCX3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Khdc4Q3TCX3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms