Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim63Q38HM4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim63Q38HM4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim63Q38HM4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim63Q38HM4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim63Q38HM4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim63Q38HM4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim63Q38HM4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim63Q38HM4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim63Q38HM4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim63Q38HM4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim63Q38HM4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim63Q38HM4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim63Q38HM4 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.52■□□□□ 0.55
Trim63Q38HM4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim63Q38HM4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim63Q38HM4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim63Q38HM4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim63Q38HM4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim63Q38HM4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.5■□□□□ 0.55
Trim63Q38HM4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim63Q38HM4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim63Q38HM4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim63Q38HM4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim63Q38HM4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim63Q38HM4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim63Q38HM4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim63Q38HM4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim63Q38HM4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim63Q38HM4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim63Q38HM4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim63Q38HM4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.46■□□□□ 0.55
Trim63Q38HM4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim63Q38HM4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim63Q38HM4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim63Q38HM4 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.45■□□□□ 0.54
Trim63Q38HM4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim63Q38HM4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Trim63Q38HM4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim63Q38HM4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim63Q38HM4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim63Q38HM4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim63Q38HM4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim63Q38HM4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim63Q38HM4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim63Q38HM4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim63Q38HM4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim63Q38HM4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim63Q38HM4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim63Q38HM4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim63Q38HM4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim63Q38HM4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim63Q38HM4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim63Q38HM4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim63Q38HM4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim63Q38HM4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim63Q38HM4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim63Q38HM4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim63Q38HM4 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.4■□□□□ 0.54
Trim63Q38HM4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim63Q38HM4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim63Q38HM4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.39■□□□□ 0.54
Trim63Q38HM4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim63Q38HM4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim63Q38HM4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim63Q38HM4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim63Q38HM4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms