Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SgcbP82349 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.86■□□□□ 0.77
SgcbP82349 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SgcbP82349 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
SgcbP82349 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SgcbP82349 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SgcbP82349 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SgcbP82349 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SgcbP82349 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.85■□□□□ 0.77
SgcbP82349 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SgcbP82349 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SgcbP82349 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SgcbP82349 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
SgcbP82349 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SgcbP82349 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.83■□□□□ 0.77
SgcbP82349 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SgcbP82349 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SgcbP82349 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SgcbP82349 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
SgcbP82349 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SgcbP82349 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SgcbP82349 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SgcbP82349 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SgcbP82349 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SgcbP82349 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SgcbP82349 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SgcbP82349 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SgcbP82349 Gm14523-201ENSMUST00000117260 558 ntBASIC19.81■□□□□ 0.76
SgcbP82349 Gm7332-201ENSMUST00000118351 454 ntBASIC19.81■□□□□ 0.76
SgcbP82349 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.81■□□□□ 0.76
SgcbP82349 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SgcbP82349 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SgcbP82349 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SgcbP82349 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SgcbP82349 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SgcbP82349 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SgcbP82349 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SgcbP82349 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SgcbP82349 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SgcbP82349 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SgcbP82349 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SgcbP82349 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SgcbP82349 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.79■□□□□ 0.76
SgcbP82349 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SgcbP82349 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SgcbP82349 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.78■□□□□ 0.76
SgcbP82349 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.78■□□□□ 0.76
SgcbP82349 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SgcbP82349 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.78■□□□□ 0.76
SgcbP82349 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SgcbP82349 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.78■□□□□ 0.76
SgcbP82349 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SgcbP82349 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SgcbP82349 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SgcbP82349 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.77■□□□□ 0.76
SgcbP82349 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SgcbP82349 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SgcbP82349 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SgcbP82349 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.76■□□□□ 0.75
SgcbP82349 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.76■□□□□ 0.75
SgcbP82349 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.76■□□□□ 0.75
SgcbP82349 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.76■□□□□ 0.75
SgcbP82349 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SgcbP82349 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SgcbP82349 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SgcbP82349 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SgcbP82349 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SgcbP82349 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SgcbP82349 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SgcbP82349 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SgcbP82349 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.74■□□□□ 0.75
SgcbP82349 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.74■□□□□ 0.75
SgcbP82349 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SgcbP82349 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SgcbP82349 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SgcbP82349 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SgcbP82349 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SgcbP82349 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.72■□□□□ 0.75
SgcbP82349 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SgcbP82349 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SgcbP82349 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SgcbP82349 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SgcbP82349 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.72■□□□□ 0.75
SgcbP82349 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SgcbP82349 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SgcbP82349 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SgcbP82349 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SgcbP82349 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SgcbP82349 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SgcbP82349 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SgcbP82349 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SgcbP82349 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SgcbP82349 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SgcbP82349 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SgcbP82349 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SgcbP82349 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SgcbP82349 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SgcbP82349 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SgcbP82349 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SgcbP82349 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms