Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.98■□□□□ 0.79
Slc1a3P56564 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a3P56564 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.98■□□□□ 0.79
Slc1a3P56564 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.97■□□□□ 0.79
Slc1a3P56564 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc1a3P56564 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc1a3P56564 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc1a3P56564 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc1a3P56564 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Slc1a3P56564 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Slc1a3P56564 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Slc1a3P56564 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc1a3P56564 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Slc1a3P56564 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc1a3P56564 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Slc1a3P56564 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc1a3P56564 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc1a3P56564 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc1a3P56564 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc1a3P56564 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc1a3P56564 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc1a3P56564 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc1a3P56564 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc1a3P56564 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Slc1a3P56564 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.94■□□□□ 0.78
Slc1a3P56564 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc1a3P56564 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc1a3P56564 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc1a3P56564 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.94■□□□□ 0.78
Slc1a3P56564 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc1a3P56564 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Slc1a3P56564 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Slc1a3P56564 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Slc1a3P56564 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc1a3P56564 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.92■□□□□ 0.78
Slc1a3P56564 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.92■□□□□ 0.78
Slc1a3P56564 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc1a3P56564 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc1a3P56564 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Slc1a3P56564 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc1a3P56564 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc1a3P56564 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc1a3P56564 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc1a3P56564 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Slc1a3P56564 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.91■□□□□ 0.78
Slc1a3P56564 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.91■□□□□ 0.78
Slc1a3P56564 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc1a3P56564 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc1a3P56564 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc1a3P56564 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc1a3P56564 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc1a3P56564 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc1a3P56564 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc1a3P56564 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc1a3P56564 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc1a3P56564 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Slc1a3P56564 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc1a3P56564 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc1a3P56564 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc1a3P56564 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc1a3P56564 Nkain2-201ENSMUST00000092602 558 ntBASIC19.88■□□□□ 0.77
Slc1a3P56564 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc1a3P56564 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Slc1a3P56564 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc1a3P56564 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Slc1a3P56564 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc1a3P56564 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc1a3P56564 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc1a3P56564 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc1a3P56564 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slc1a3P56564 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc1a3P56564 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc1a3P56564 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc1a3P56564 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc1a3P56564 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc1a3P56564 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc1a3P56564 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc1a3P56564 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc1a3P56564 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc1a3P56564 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc1a3P56564 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Slc1a3P56564 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a3P56564 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a3P56564 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.83■□□□□ 0.77
Slc1a3P56564 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc1a3P56564 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Slc1a3P56564 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Slc1a3P56564 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc1a3P56564 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc1a3P56564 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.82■□□□□ 0.76
Slc1a3P56564 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a3P56564 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a3P56564 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a3P56564 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Slc1a3P56564 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Slc1a3P56564 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a3P56564 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a3P56564 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a3P56564 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a3P56564 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms