Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.43■■□□□ 1.02
Cdkn2bP55271 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cdkn2bP55271 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkn2bP55271 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cdkn2bP55271 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkn2bP55271 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkn2bP55271 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkn2bP55271 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkn2bP55271 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.41■■□□□ 1.02
Cdkn2bP55271 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkn2bP55271 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cdkn2bP55271 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkn2bP55271 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.4■■□□□ 1.02
Cdkn2bP55271 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cdkn2bP55271 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkn2bP55271 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkn2bP55271 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkn2bP55271 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.39■■□□□ 1.01
Cdkn2bP55271 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkn2bP55271 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkn2bP55271 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkn2bP55271 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkn2bP55271 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdkn2bP55271 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkn2bP55271 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkn2bP55271 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkn2bP55271 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.37■■□□□ 1.01
Cdkn2bP55271 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkn2bP55271 Gm6821-201ENSMUST00000107540 542 ntBASIC21.37■■□□□ 1.01
Cdkn2bP55271 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkn2bP55271 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkn2bP55271 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkn2bP55271 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.36■■□□□ 1.01
Cdkn2bP55271 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkn2bP55271 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkn2bP55271 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkn2bP55271 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkn2bP55271 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cdkn2bP55271 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkn2bP55271 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.34■■□□□ 1.01
Cdkn2bP55271 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkn2bP55271 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.33■■□□□ 1.01
Cdkn2bP55271 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Cdkn2bP55271 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.33■■□□□ 1.01
Cdkn2bP55271 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.33■■□□□ 1.01
Cdkn2bP55271 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdkn2bP55271 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdkn2bP55271 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Cdkn2bP55271 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkn2bP55271 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.32■■□□□ 1
Cdkn2bP55271 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkn2bP55271 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkn2bP55271 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.32■■□□□ 1
Cdkn2bP55271 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkn2bP55271 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.31■■□□□ 1
Cdkn2bP55271 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.31■■□□□ 1
Cdkn2bP55271 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cdkn2bP55271 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdkn2bP55271 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.3■■□□□ 1
Cdkn2bP55271 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkn2bP55271 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkn2bP55271 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.3■■□□□ 1
Cdkn2bP55271 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Cdkn2bP55271 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cdkn2bP55271 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkn2bP55271 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cdkn2bP55271 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cdkn2bP55271 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Cdkn2bP55271 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkn2bP55271 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.29■■□□□ 1
Cdkn2bP55271 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.29■■□□□ 1
Cdkn2bP55271 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
Cdkn2bP55271 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cdkn2bP55271 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkn2bP55271 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkn2bP55271 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkn2bP55271 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cdkn2bP55271 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkn2bP55271 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkn2bP55271 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkn2bP55271 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkn2bP55271 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkn2bP55271 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkn2bP55271 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdkn2bP55271 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.27■■□□□ 1
Cdkn2bP55271 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkn2bP55271 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Cdkn2bP55271 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkn2bP55271 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.26■□□□□ 0.99
Cdkn2bP55271 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkn2bP55271 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkn2bP55271 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms