Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdx1P52946 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdx1P52946 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdx1P52946 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pdx1P52946 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.12■■□□□ 1.13
Pdx1P52946 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdx1P52946 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pdx1P52946 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pdx1P52946 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pdx1P52946 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pdx1P52946 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pdx1P52946 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pdx1P52946 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pdx1P52946 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Pdx1P52946 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.08■■□□□ 1.13
Pdx1P52946 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pdx1P52946 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pdx1P52946 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pdx1P52946 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pdx1P52946 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pdx1P52946 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Pdx1P52946 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.06■■□□□ 1.12
Pdx1P52946 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.06■■□□□ 1.12
Pdx1P52946 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.06■■□□□ 1.12
Pdx1P52946 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pdx1P52946 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pdx1P52946 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pdx1P52946 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pdx1P52946 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Pdx1P52946 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pdx1P52946 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pdx1P52946 Mir6538-201ENSMUST00000183713 110 ntBASIC22.04■■□□□ 1.12
Pdx1P52946 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pdx1P52946 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pdx1P52946 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Pdx1P52946 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.03■■□□□ 1.12
Pdx1P52946 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pdx1P52946 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.03■■□□□ 1.12
Pdx1P52946 Gm27502-201ENSMUST00000183495 199 ntBASIC22.03■■□□□ 1.12
Pdx1P52946 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.03■■□□□ 1.12
Pdx1P52946 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pdx1P52946 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pdx1P52946 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pdx1P52946 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pdx1P52946 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.02■■□□□ 1.12
Pdx1P52946 Gm44428-201ENSMUST00000204474 874 ntBASIC22.02■■□□□ 1.12
Pdx1P52946 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pdx1P52946 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pdx1P52946 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pdx1P52946 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pdx1P52946 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
Pdx1P52946 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdx1P52946 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.99■■□□□ 1.11
Pdx1P52946 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.99■■□□□ 1.11
Pdx1P52946 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdx1P52946 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pdx1P52946 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pdx1P52946 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Pdx1P52946 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.98■■□□□ 1.11
Pdx1P52946 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pdx1P52946 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pdx1P52946 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pdx1P52946 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pdx1P52946 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pdx1P52946 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pdx1P52946 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pdx1P52946 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Pdx1P52946 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pdx1P52946 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.96■■□□□ 1.11
Pdx1P52946 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdx1P52946 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdx1P52946 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdx1P52946 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pdx1P52946 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pdx1P52946 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pdx1P52946 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.95■■□□□ 1.1
Pdx1P52946 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pdx1P52946 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pdx1P52946 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Pdx1P52946 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pdx1P52946 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Pdx1P52946 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pdx1P52946 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pdx1P52946 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pdx1P52946 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Pdx1P52946 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdx1P52946 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pdx1P52946 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdx1P52946 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdx1P52946 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdx1P52946 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.92■■□□□ 1.1
Pdx1P52946 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pdx1P52946 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Pdx1P52946 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pdx1P52946 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pdx1P52946 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.91■■□□□ 1.1
Pdx1P52946 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pdx1P52946 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.91■■□□□ 1.1
Pdx1P52946 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pdx1P52946 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 1688 ms